(15 nodes) Proteasome accessory complex network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	A0A194YST1	AAA domain-containing protein; Belongs to the AAA ATPase family. (428 aa)
	A0A1B6PLN8	PCI domain-containing protein. (388 aa)
	A0A1B6QPQ3	AAA domain-containing protein; Belongs to the AAA ATPase family. (420 aa)
	A0A1Z5RER9	PCI domain-containing protein. (168 aa)
	C5WP38_SORBI	VWFA domain-containing protein. (400 aa)
	C5X6E9_SORBI	AAA domain-containing protein; Belongs to the AAA ATPase family. (447 aa)
	C5XGK3_SORBI	MPN domain-containing protein. (307 aa)
	C5XTQ4_SORBI	AAA domain-containing protein; Belongs to the AAA ATPase family. (426 aa)
	C5XUM4_SORBI	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (894 aa)
	C5XXY0_SORBI	AAA domain-containing protein; Belongs to the AAA ATPase family. (422 aa)
	C5Y9M7_SORBI	MPN domain-containing protein. (310 aa)
	C5YH21_SORBI	PCI domain-containing protein. (496 aa)
	C5YIY1_SORBI	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (988 aa)
	C5YRI0_SORBI	PCI domain-containing protein. (426 aa)
	C5YX27_SORBI	RPN13_C domain-containing protein. (309 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A194YST1	A0A1B6PLN8	A0A194YST1	A0A1B6PLN8	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.991
A0A194YST1	A0A1B6QPQ3	A0A194YST1	A0A1B6QPQ3	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.993
A0A194YST1	A0A1Z5RER9	A0A194YST1	A0A1Z5RER9	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.994
A0A194YST1	C5WP38_SORBI	A0A194YST1	C5WP38	AAA domain-containing protein; Belongs to the AAA ATPase family.	VWFA domain-containing protein.	0.995
A0A194YST1	C5X6E9_SORBI	A0A194YST1	C5X6E9	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.998
A0A194YST1	C5XGK3_SORBI	A0A194YST1	C5XGK3	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.994
A0A194YST1	C5XTQ4_SORBI	A0A194YST1	C5XTQ4	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.995
A0A194YST1	C5XUM4_SORBI	A0A194YST1	C5XUM4	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.998
A0A194YST1	C5XXY0_SORBI	A0A194YST1	C5XXY0	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.995
A0A194YST1	C5Y9M7_SORBI	A0A194YST1	C5Y9M7	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.997
A0A194YST1	C5YH21_SORBI	A0A194YST1	C5YH21	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.996
A0A194YST1	C5YIY1_SORBI	A0A194YST1	C5YIY1	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.991
A0A194YST1	C5YRI0_SORBI	A0A194YST1	C5YRI0	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.994
A0A194YST1	C5YX27_SORBI	A0A194YST1	C5YX27	AAA domain-containing protein; Belongs to the AAA ATPase family.	RPN13_C domain-containing protein.	0.995
A0A1B6PLN8	A0A194YST1	A0A1B6PLN8	A0A194YST1	PCI domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.991
A0A1B6PLN8	A0A1B6QPQ3	A0A1B6PLN8	A0A1B6QPQ3	PCI domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.983
A0A1B6PLN8	A0A1Z5RER9	A0A1B6PLN8	A0A1Z5RER9	PCI domain-containing protein.	PCI domain-containing protein.	0.991
A0A1B6PLN8	C5WP38_SORBI	A0A1B6PLN8	C5WP38	PCI domain-containing protein.	VWFA domain-containing protein.	0.991
A0A1B6PLN8	C5X6E9_SORBI	A0A1B6PLN8	C5X6E9	PCI domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.996
A0A1B6PLN8	C5XGK3_SORBI	A0A1B6PLN8	C5XGK3	PCI domain-containing protein.	MPN domain-containing protein.	0.991

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