13 items (Sorghum bicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A194YIG2	Uncharacterized protein. (408 aa)
	A0A1B6PAF7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (582 aa)
	A0A1B6QCE9	Uncharacterized protein. (398 aa)
	A0A1B6QD96	Uncharacterized protein. (877 aa)
	A0A1Z5R6Q5	Uncharacterized protein; Belongs to the peptidase C19 family. (1012 aa)
	C5WTK1_SORBI	Uncharacterized protein. (580 aa)
	C5WWH4_SORBI	U-box domain-containing protein. (1030 aa)
	C5WZW0_SORBI	Uncharacterized protein. (538 aa)
	C5XCV9_SORBI	Uncharacterized protein. (153 aa)
	C5XMS9_SORBI	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (837 aa)
	C5XWB3_SORBI	Uncharacterized protein. (369 aa)
	C5YL31_SORBI	Uncharacterized protein. (860 aa)
	C5Z6U2_SORBI	Uncharacterized protein. (153 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A194YIG2	A0A1B6PAF7	A0A194YIG2	A0A1B6PAF7	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.570
A0A194YIG2	A0A1B6QCE9	A0A194YIG2	A0A1B6QCE9	Uncharacterized protein.	Uncharacterized protein.	0.902
A0A194YIG2	A0A1B6QD96	A0A194YIG2	A0A1B6QD96	Uncharacterized protein.	Uncharacterized protein.	0.709
A0A194YIG2	A0A1Z5R6Q5	A0A194YIG2	A0A1Z5R6Q5	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.456
A0A194YIG2	C5WTK1_SORBI	A0A194YIG2	C5WTK1	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A194YIG2	C5WWH4_SORBI	A0A194YIG2	C5WWH4	Uncharacterized protein.	U-box domain-containing protein.	0.898
A0A194YIG2	C5WZW0_SORBI	A0A194YIG2	C5WZW0	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A194YIG2	C5XCV9_SORBI	A0A194YIG2	C5XCV9	Uncharacterized protein.	Uncharacterized protein.	0.611
A0A194YIG2	C5XMS9_SORBI	A0A194YIG2	C5XMS9	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	0.763
A0A194YIG2	C5XWB3_SORBI	A0A194YIG2	C5XWB3	Uncharacterized protein.	Uncharacterized protein.	0.903
A0A194YIG2	C5YL31_SORBI	A0A194YIG2	C5YL31	Uncharacterized protein.	Uncharacterized protein.	0.964
A0A194YIG2	C5Z6U2_SORBI	A0A194YIG2	C5Z6U2	Uncharacterized protein.	Uncharacterized protein.	0.611
A0A1B6PAF7	A0A194YIG2	A0A1B6PAF7	A0A194YIG2	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.570
A0A1B6PAF7	A0A1B6QCE9	A0A1B6PAF7	A0A1B6QCE9	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.570
A0A1B6PAF7	A0A1B6QD96	A0A1B6PAF7	A0A1B6QD96	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.873
A0A1B6PAF7	A0A1Z5R6Q5	A0A1B6PAF7	A0A1Z5R6Q5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.462
A0A1B6PAF7	C5WTK1_SORBI	A0A1B6PAF7	C5WTK1	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.618
A0A1B6PAF7	C5WWH4_SORBI	A0A1B6PAF7	C5WWH4	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	U-box domain-containing protein.	0.611
A0A1B6PAF7	C5WZW0_SORBI	A0A1B6PAF7	C5WZW0	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.618
A0A1B6PAF7	C5XMS9_SORBI	A0A1B6PAF7	C5XMS9	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	0.771

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