STRINGSTRING
SORBI_K012800 SORBI_K012800 A0A194YH02 A0A194YH02 A0A194YJ96 A0A194YJ96 A0A194YPF1 A0A194YPF1 A0A194YPW9 A0A194YPW9 A0A194YPX4 A0A194YPX4 A0A1B6P7T4 A0A1B6P7T4 A0A1B6P7U5 A0A1B6P7U5 A0A1B6P874 A0A1B6P874 A0A1B6P954 A0A1B6P954 A0A1B6PB81 A0A1B6PB81 A0A1B6PBY1 A0A1B6PBY1 A0A1B6PH96 A0A1B6PH96 A0A1B6PKK0 A0A1B6PKK0 A0A1B6PSZ3 A0A1B6PSZ3 A0A1B6Q0J8 A0A1B6Q0J8 A0A1B6Q0S4 A0A1B6Q0S4 A0A1B6Q126 A0A1B6Q126 A0A1B6Q3T6 A0A1B6Q3T6 A0A1B6Q6Z3 A0A1B6Q6Z3 A0A1B6QA20 A0A1B6QA20 A0A1B6QBA2 A0A1B6QBA2 A0A1B6QJ43 A0A1B6QJ43 A0A1B6QLH3 A0A1B6QLH3 A0A1B6QLX3 A0A1B6QLX3 A0A1B6QLY4 A0A1B6QLY4 A0A1B6QMY0 A0A1B6QMY0 A0A1B6QQM5 A0A1B6QQM5 A0A1B6QR69 A0A1B6QR69 A0A1W0VT36 A0A1W0VT36 A0A1W0VT47 A0A1W0VT47 A0A1W0VT72 A0A1W0VT72 A0A1W0W0E0 A0A1W0W0E0 A0A1Z5R255 A0A1Z5R255 A0A1Z5R4C0 A0A1Z5R4C0 A0A1Z5RBA1 A0A1Z5RBA1 A0A1Z5RGS6 A0A1Z5RGS6 A0A1Z5RH19 A0A1Z5RH19 A0A1Z5RJL3 A0A1Z5RJL3 A0A1Z5RKJ6 A0A1Z5RKJ6 A0A1Z5RPM6 A0A1Z5RPM6 A0A1Z5RQW4 A0A1Z5RQW4 C5WQC5_SORBI C5WQC5_SORBI C5WTX4_SORBI C5WTX4_SORBI C5WWE0_SORBI C5WWE0_SORBI C5WWE1_SORBI C5WWE1_SORBI C5WWP5_SORBI C5WWP5_SORBI C5WX87_SORBI C5WX87_SORBI C5WY83_SORBI C5WY83_SORBI C5WZ42_SORBI C5WZ42_SORBI C5X2N4_SORBI C5X2N4_SORBI C5X9A0_SORBI C5X9A0_SORBI C5X9E8_SORBI C5X9E8_SORBI C5X9I2_SORBI C5X9I2_SORBI C5XAC6_SORBI C5XAC6_SORBI C5XCU2_SORBI C5XCU2_SORBI C5XEW0_SORBI C5XEW0_SORBI LSM4 LSM4 C5XGJ1_SORBI C5XGJ1_SORBI C5XJ17_SORBI C5XJ17_SORBI C5XKZ0_SORBI C5XKZ0_SORBI C5XMP1_SORBI C5XMP1_SORBI C5XMS5_SORBI C5XMS5_SORBI C5XNS4_SORBI C5XNS4_SORBI LSM3 LSM3 C5XR40_SORBI C5XR40_SORBI C5XSB8_SORBI C5XSB8_SORBI C5XTA6_SORBI C5XTA6_SORBI C5XTP2_SORBI C5XTP2_SORBI C5XUG9_SORBI C5XUG9_SORBI C5XWG7_SORBI C5XWG7_SORBI C5XZS6_SORBI C5XZS6_SORBI C5Y580_SORBI C5Y580_SORBI C5Y711_SORBI C5Y711_SORBI LSM1 LSM1 C5YAP8_SORBI C5YAP8_SORBI C5YET4_SORBI C5YET4_SORBI C5YFQ1_SORBI C5YFQ1_SORBI C5YGY2_SORBI C5YGY2_SORBI C5YJ92_SORBI C5YJ92_SORBI C5YL85_SORBI C5YL85_SORBI C5YLK4_SORBI C5YLK4_SORBI LSM5 LSM5 C5YYP8_SORBI C5YYP8_SORBI C5Z0U7_SORBI C5Z0U7_SORBI C5Z2C6_SORBI C5Z2C6_SORBI C5Z3R3_SORBI C5Z3R3_SORBI C5Z8E1_SORBI C5Z8E1_SORBI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SORBI_K012800Uncharacterized protein. (244 aa)
A0A194YH02Fe2OG dioxygenase domain-containing protein. (611 aa)
A0A194YJ96Uncharacterized protein. (269 aa)
A0A194YPF1Uncharacterized protein. (788 aa)
A0A194YPW9Sm domain-containing protein. (97 aa)
A0A194YPX4Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
A0A1B6P7T4F-box domain-containing protein. (422 aa)
A0A1B6P7U5F-box domain-containing protein. (428 aa)
A0A1B6P874F-box domain-containing protein. (412 aa)
A0A1B6P954DUF1618 domain-containing protein. (426 aa)
A0A1B6PB81Uncharacterized protein. (346 aa)
A0A1B6PBY1WH1 domain-containing protein. (370 aa)
A0A1B6PH96Uncharacterized protein. (336 aa)
A0A1B6PKK0Uncharacterized protein. (1061 aa)
A0A1B6PSZ3Uncharacterized protein. (188 aa)
A0A1B6Q0J8DUF1618 domain-containing protein. (395 aa)
A0A1B6Q0S4Uncharacterized protein. (828 aa)
A0A1B6Q126DUF1618 domain-containing protein. (389 aa)
A0A1B6Q3T6PAP-associated domain-containing protein. (233 aa)
A0A1B6Q6Z3Uncharacterized protein. (604 aa)
A0A1B6QA20Uncharacterized protein. (450 aa)
A0A1B6QBA2Uncharacterized protein. (1046 aa)
A0A1B6QJ43Uncharacterized protein. (858 aa)
A0A1B6QLH3PAP-associated domain-containing protein. (704 aa)
A0A1B6QLX3Uncharacterized protein. (341 aa)
A0A1B6QLY4Uncharacterized protein. (2421 aa)
A0A1B6QMY0RRM domain-containing protein. (503 aa)
A0A1B6QQM5DUF1618 domain-containing protein. (484 aa)
A0A1B6QR69Uncharacterized protein. (2416 aa)
A0A1W0VT36Uncharacterized protein. (301 aa)
A0A1W0VT47Uncharacterized protein. (163 aa)
A0A1W0VT72Uncharacterized protein. (203 aa)
A0A1W0W0E0Uncharacterized protein. (507 aa)
A0A1Z5R255F-box domain-containing protein. (392 aa)
A0A1Z5R4C0NOT2_3_5 domain-containing protein. (625 aa)
A0A1Z5RBA1DUF1618 domain-containing protein. (526 aa)
A0A1Z5RGS6Fe2OG dioxygenase domain-containing protein. (345 aa)
A0A1Z5RH19Uncharacterized protein. (231 aa)
A0A1Z5RJL3Uncharacterized protein. (188 aa)
A0A1Z5RKJ6Uncharacterized protein. (647 aa)
A0A1Z5RPM6DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (996 aa)
A0A1Z5RQW4DUF1618 domain-containing protein. (479 aa)
C5WQC5_SORBIFLZ-type domain-containing protein. (314 aa)
C5WTX4_SORBIUncharacterized protein. (393 aa)
C5WWE0_SORBIUncharacterized protein; Belongs to the DEAD box helicase family. (507 aa)
C5WWE1_SORBIUncharacterized protein; Belongs to the DEAD box helicase family. (507 aa)
C5WWP5_SORBIUncharacterized protein. (282 aa)
C5WX87_SORBI5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (990 aa)
C5WY83_SORBIUncharacterized protein. (313 aa)
C5WZ42_SORBIGYF domain-containing protein. (1230 aa)
C5X2N4_SORBIWH1 domain-containing protein. (385 aa)
C5X9A0_SORBIHelicase ATP-binding domain-containing protein. (1269 aa)
C5X9E8_SORBIGYF domain-containing protein. (1648 aa)
C5X9I2_SORBIUncharacterized protein. (271 aa)
C5XAC6_SORBIUncharacterized protein. (576 aa)
C5XCU2_SORBIUncharacterized protein. (279 aa)
C5XEW0_SORBIUncharacterized protein. (662 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (145 aa)
C5XGJ1_SORBIHTH La-type RNA-binding domain-containing protein. (951 aa)
C5XJ17_SORBIF-box domain-containing protein. (457 aa)
C5XKZ0_SORBIUncharacterized protein. (810 aa)
C5XMP1_SORBIFLZ-type domain-containing protein. (284 aa)
C5XMS5_SORBIUncharacterized protein. (177 aa)
C5XNS4_SORBIUncharacterized protein. (446 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
C5XR40_SORBIRRM domain-containing protein. (553 aa)
C5XSB8_SORBIRPOL4c domain-containing protein. (143 aa)
C5XTA6_SORBIRibonuclease; Cytoprotective ribonuclease (RNase) required for resistance to abiotic stresses, acting as a positive regulator of mRNA decapping during stress. (986 aa)
C5XTP2_SORBINOT2_3_5 domain-containing protein. (614 aa)
C5XUG9_SORBIUncharacterized protein. (288 aa)
C5XWG7_SORBIFLZ-type domain-containing protein. (132 aa)
C5XZS6_SORBIUncharacterized protein. (1337 aa)
C5Y580_SORBIUncharacterized protein. (298 aa)
C5Y711_SORBIUncharacterized protein. (281 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
C5YAP8_SORBIUncharacterized protein. (335 aa)
C5YET4_SORBISm domain-containing protein. (97 aa)
C5YFQ1_SORBIUncharacterized protein. (321 aa)
C5YGY2_SORBISm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
C5YJ92_SORBIDUF1618 domain-containing protein. (415 aa)
C5YL85_SORBIRRM domain-containing protein. (462 aa)
C5YLK4_SORBIUncharacterized protein. (286 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (88 aa)
C5YYP8_SORBIUncharacterized protein. (444 aa)
C5Z0U7_SORBIUncharacterized protein. (802 aa)
C5Z2C6_SORBIUncharacterized protein. (643 aa)
C5Z3R3_SORBIUncharacterized protein. (316 aa)
C5Z8E1_SORBINudix hydrolase domain-containing protein. (323 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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