STRINGSTRING
DHN2 DHN2 LSM1 LSM1 C5YB21_SORBI C5YB21_SORBI C5YGM9_SORBI C5YGM9_SORBI C5YPT7_SORBI C5YPT7_SORBI C5YQY4_SORBI C5YQY4_SORBI C5YSA4_SORBI C5YSA4_SORBI C5YUN2_SORBI C5YUN2_SORBI C5YUV0_SORBI C5YUV0_SORBI C5YVW4_SORBI C5YVW4_SORBI C5Z2J6_SORBI C5Z2J6_SORBI C5Z9C7_SORBI C5Z9C7_SORBI A0A1B6PFD0 A0A1B6PFD0 A0A1B6PH98 A0A1B6PH98 A0A1B6PIX8 A0A1B6PIX8 A0A1B6PQ50 A0A1B6PQ50 A0A1B6Q560 A0A1B6Q560 A0A1B6QMP0 A0A1B6QMP0 A0A1W0VYT8 A0A1W0VYT8 A0A1W0W0E6 A0A1W0W0E6 A0A1Z5R7X3 A0A1Z5R7X3 A0A1Z5R8A7 A0A1Z5R8A7 A0A1Z5RKL6 A0A1Z5RKL6 C5WS57_SORBI C5WS57_SORBI C5WXH7_SORBI C5WXH7_SORBI C5WYM4_SORBI C5WYM4_SORBI C5X4J3_SORBI C5X4J3_SORBI C5X869_SORBI C5X869_SORBI C5XD18_SORBI C5XD18_SORBI C5XE14_SORBI C5XE14_SORBI C5XHK8_SORBI C5XHK8_SORBI C5XT02_SORBI C5XT02_SORBI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DHN2Dehydrin; Belongs to the plant dehydrin family. (283 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
C5YB21_SORBIUncharacterized protein. (420 aa)
C5YGM9_SORBIUncharacterized protein. (215 aa)
C5YPT7_SORBIPrefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (191 aa)
C5YQY4_SORBIUncharacterized protein; Belongs to the endosulfine family. (146 aa)
C5YSA4_SORBIUncharacterized protein. (417 aa)
C5YUN2_SORBIUncharacterized protein. (147 aa)
C5YUV0_SORBIJ domain-containing protein. (338 aa)
C5YVW4_SORBIUncharacterized protein. (226 aa)
C5Z2J6_SORBICatalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (492 aa)
C5Z9C7_SORBIUncharacterized protein. (114 aa)
A0A1B6PFD0Protein kinase domain-containing protein. (431 aa)
A0A1B6PH98Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1727 aa)
A0A1B6PIX8J domain-containing protein. (391 aa)
A0A1B6PQ50Uncharacterized protein. (445 aa)
A0A1B6Q560Uncharacterized protein. (191 aa)
A0A1B6QMP0PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (492 aa)
A0A1W0VYT8Uncharacterized protein. (192 aa)
A0A1W0W0E6Uncharacterized protein. (652 aa)
A0A1Z5R7X3Protein kinase domain-containing protein. (326 aa)
A0A1Z5R8A7DUF2428 domain-containing protein. (2162 aa)
A0A1Z5RKL6Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (514 aa)
C5WS57_SORBIPrefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family. (126 aa)
C5WXH7_SORBIUncharacterized protein. (150 aa)
C5WYM4_SORBIUncharacterized protein. (262 aa)
C5X4J3_SORBIJ domain-containing protein. (392 aa)
C5X869_SORBIMediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1723 aa)
C5XD18_SORBIUncharacterized protein. (157 aa)
C5XE14_SORBIPKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (496 aa)
C5XHK8_SORBIJ domain-containing protein. (337 aa)
C5XT02_SORBIUncharacterized protein. (229 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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