STRINGSTRING
C5YYU0_SORBI C5YYU0_SORBI A0A194YJ10 A0A194YJ10 A0A194YST9 A0A194YST9 A0A1B6P941 A0A1B6P941 A0A1B6PP80 A0A1B6PP80 A0A1B6Q571 A0A1B6Q571 A0A1B6Q7W2 A0A1B6Q7W2 A0A1B6QCA8 A0A1B6QCA8 SORBI_3K016900 SORBI_3K016900 A0A1W0VSD8 A0A1W0VSD8 A0A1W0VY05 A0A1W0VY05 A0A1W0W3T6 A0A1W0W3T6 A0A1W0W6F5 A0A1W0W6F5 A0A1Z5RAM0 A0A1Z5RAM0 A0A1Z5RFS4 A0A1Z5RFS4 A0A1Z5S8A5 A0A1Z5S8A5 C5WNL3_SORBI C5WNL3_SORBI C5WTL3_SORBI C5WTL3_SORBI C5XFY8_SORBI C5XFY8_SORBI C5XK67_SORBI C5XK67_SORBI C5XMI1_SORBI C5XMI1_SORBI C5XPZ8_SORBI C5XPZ8_SORBI C5Y4W2_SORBI C5Y4W2_SORBI C5YVI7_SORBI C5YVI7_SORBI C5Z0A8_SORBI C5Z0A8_SORBI C5Z4C9_SORBI C5Z4C9_SORBI C5Z8V9_SORBI C5Z8V9_SORBI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C5YYU0_SORBIArginyl-tRNA--protein transferase; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family. (638 aa)
A0A194YJ10Uncharacterized protein. (181 aa)
A0A194YST9BHLH domain-containing protein. (292 aa)
A0A1B6P941F-box domain-containing protein. (293 aa)
A0A1B6PP80Uncharacterized protein. (530 aa)
A0A1B6Q571Uncharacterized protein. (110 aa)
A0A1B6Q7W2Uncharacterized protein. (1005 aa)
A0A1B6QCA8RING-type E3 ubiquitin transferase. (716 aa)
SORBI_3K016900Arginyl-tRNA--protein transferase; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family. (565 aa)
A0A1W0VSD8Uncharacterized protein. (101 aa)
A0A1W0VY05JmjC domain-containing protein. (486 aa)
A0A1W0W3T6Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (413 aa)
A0A1W0W6F5C2 NT-type domain-containing protein. (971 aa)
A0A1Z5RAM0RING-type E3 ubiquitin transferase. (714 aa)
A0A1Z5RFS4Uncharacterized protein. (557 aa)
A0A1Z5S8A5BHLH domain-containing protein. (537 aa)
C5WNL3_SORBIRRM domain-containing protein. (310 aa)
C5WTL3_SORBIC2 NT-type domain-containing protein. (861 aa)
C5XFY8_SORBIWD_REPEATS_REGION domain-containing protein. (409 aa)
C5XK67_SORBIDUF1421 domain-containing protein. (587 aa)
C5XMI1_SORBIF-box domain-containing protein. (299 aa)
C5XPZ8_SORBIE3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2020 aa)
C5Y4W2_SORBIUncharacterized protein. (497 aa)
C5YVI7_SORBIDUF1421 domain-containing protein. (519 aa)
C5Z0A8_SORBIUncharacterized protein. (361 aa)
C5Z4C9_SORBIUncharacterized protein. (700 aa)
C5Z8V9_SORBIUncharacterized protein. (540 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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