STRINGSTRING
SORBI_K012800 SORBI_K012800 C5Z844_SORBI C5Z844_SORBI C5Z3R3_SORBI C5Z3R3_SORBI C5Z1R9_SORBI C5Z1R9_SORBI C5YZ37_SORBI C5YZ37_SORBI C5YXJ6_SORBI C5YXJ6_SORBI C5YXJ2_SORBI C5YXJ2_SORBI C5YXH3_SORBI C5YXH3_SORBI C5YMZ3_SORBI C5YMZ3_SORBI C5YLK4_SORBI C5YLK4_SORBI C5YLK3_SORBI C5YLK3_SORBI C5YLJ7_SORBI C5YLJ7_SORBI C5YJ92_SORBI C5YJ92_SORBI C5YIV1_SORBI C5YIV1_SORBI C5YGR2_SORBI C5YGR2_SORBI C5YG62_SORBI C5YG62_SORBI C5YDA4_SORBI C5YDA4_SORBI C5YAP8_SORBI C5YAP8_SORBI C5YA90_SORBI C5YA90_SORBI C5Y711_SORBI C5Y711_SORBI C5Y6L0_SORBI C5Y6L0_SORBI C5Y580_SORBI C5Y580_SORBI C5Y140_SORBI C5Y140_SORBI C5XYP2_SORBI C5XYP2_SORBI C5XXP5_SORBI C5XXP5_SORBI C5XVE8_SORBI C5XVE8_SORBI C5XUG9_SORBI C5XUG9_SORBI C5XRF5_SORBI C5XRF5_SORBI C5XQY7_SORBI C5XQY7_SORBI C5XNS4_SORBI C5XNS4_SORBI C5XLR8_SORBI C5XLR8_SORBI C5XHC7_SORBI C5XHC7_SORBI C5XGF0_SORBI C5XGF0_SORBI C5XCU2_SORBI C5XCU2_SORBI C5XAC6_SORBI C5XAC6_SORBI C5X9M5_SORBI C5X9M5_SORBI C5X6U3_SORBI C5X6U3_SORBI C5WZX9_SORBI C5WZX9_SORBI C5WX87_SORBI C5WX87_SORBI C5WUS3_SORBI C5WUS3_SORBI A0A1Z5S7N5 A0A1Z5S7N5 A0A1Z5S7C0 A0A1Z5S7C0 A0A1Z5S782 A0A1Z5S782 A0A1Z5RPM6 A0A1Z5RPM6 A0A1Z5RNG0 A0A1Z5RNG0 A0A1Z5RJL3 A0A1Z5RJL3 A0A1Z5RHS3 A0A1Z5RHS3 A0A1Z5RHK1 A0A1Z5RHK1 A0A1Z5RD95 A0A1Z5RD95 A0A1Z5RBA1 A0A1Z5RBA1 A0A1Z5R9P2 A0A1Z5R9P2 A0A1Z5R981 A0A1Z5R981 A0A1Z5R8K6 A0A1Z5R8K6 A0A1Z5R8E7 A0A1Z5R8E7 A0A1Z5R255 A0A1Z5R255 A0A1W0W0C8 A0A1W0W0C8 A0A1W0VZV3 A0A1W0VZV3 A0A1W0VT72 A0A1W0VT72 A0A1W0VT47 A0A1W0VT47 A0A1W0VT36 A0A1W0VT36 A0A1B6QQM5 A0A1B6QQM5 A0A1B6QQE5 A0A1B6QQE5 A0A1B6QQB7 A0A1B6QQB7 A0A1B6QNS7 A0A1B6QNS7 A0A1B6QNR0 A0A1B6QNR0 A0A1B6QLX3 A0A1B6QLX3 A0A1B6QKN7 A0A1B6QKN7 A0A1B6QEJ2 A0A1B6QEJ2 A0A1B6QCQ5 A0A1B6QCQ5 A0A1B6QA20 A0A1B6QA20 A0A1B6Q972 A0A1B6Q972 A0A1B6Q6M5 A0A1B6Q6M5 A0A1B6Q0J8 A0A1B6Q0J8 A0A1B6PSZ3 A0A1B6PSZ3 A0A1B6PPS5 A0A1B6PPS5 A0A1B6PH96 A0A1B6PH96 A0A1B6PB81 A0A1B6PB81 A0A1B6P874 A0A1B6P874 A0A1B6P7U5 A0A1B6P7U5 A0A1B6P7T4 A0A1B6P7T4 A0A194YSF4 A0A194YSF4 A0A194YRB7 A0A194YRB7 A0A194YJ96 A0A194YJ96
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SORBI_K012800Uncharacterized protein. (244 aa)
C5Z844_SORBIEndo/exonuclease/phosphatase domain-containing protein. (468 aa)
C5Z3R3_SORBIUncharacterized protein. (316 aa)
C5Z1R9_SORBIExonuclease domain-containing protein. (330 aa)
C5YZ37_SORBIUncharacterized protein. (374 aa)
C5YXJ6_SORBIExonuclease domain-containing protein. (283 aa)
C5YXJ2_SORBIRAI1 domain-containing protein. (529 aa)
C5YXH3_SORBIEndo/exonuclease/phosphatase domain-containing protein. (393 aa)
C5YMZ3_SORBIDNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (369 aa)
C5YLK4_SORBIUncharacterized protein. (286 aa)
C5YLK3_SORBIUncharacterized protein. (599 aa)
C5YLJ7_SORBIUncharacterized protein. (699 aa)
C5YJ92_SORBIDUF1618 domain-containing protein. (415 aa)
C5YIV1_SORBIExonuclease domain-containing protein. (283 aa)
C5YGR2_SORBIDouble-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (704 aa)
C5YG62_SORBIExonuclease domain-containing protein. (283 aa)
C5YDA4_SORBIEndo/exonuclease/phosphatase domain-containing protein. (308 aa)
C5YAP8_SORBIUncharacterized protein. (335 aa)
C5YA90_SORBIUncharacterized protein. (719 aa)
C5Y711_SORBIUncharacterized protein. (281 aa)
C5Y6L0_SORBIDNA polymerase. (1099 aa)
C5Y580_SORBIUncharacterized protein. (298 aa)
C5Y140_SORBIExonuclease domain-containing protein. (246 aa)
C5XYP2_SORBIPOLIIIAc domain-containing protein. (427 aa)
C5XXP5_SORBIS1 motif domain-containing protein. (983 aa)
C5XVE8_SORBIDNA polymerase. (1101 aa)
C5XUG9_SORBIUncharacterized protein. (288 aa)
C5XRF5_SORBIDRMBL domain-containing protein. (619 aa)
C5XQY7_SORBIEndo/exonuclease/phosphatase domain-containing protein. (872 aa)
C5XNS4_SORBIUncharacterized protein. (446 aa)
C5XLR8_SORBIDRMBL domain-containing protein. (453 aa)
C5XHC7_SORBIExonuclease domain-containing protein. (424 aa)
C5XGF0_SORBI5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1066 aa)
C5XCU2_SORBIUncharacterized protein. (279 aa)
C5XAC6_SORBIUncharacterized protein. (576 aa)
C5X9M5_SORBIUncharacterized protein. (324 aa)
C5X6U3_SORBIUncharacterized protein. (618 aa)
C5WZX9_SORBIUncharacterized protein; Belongs to the RNR ribonuclease family. (934 aa)
C5WX87_SORBI5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (990 aa)
C5WUS3_SORBIPOLIIIAc domain-containing protein. (418 aa)
A0A1Z5S7N5EF-hand domain-containing protein. (455 aa)
A0A1Z5S7C03'-5' exonuclease domain-containing protein. (302 aa)
A0A1Z5S782Uncharacterized protein. (606 aa)
A0A1Z5RPM6DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (996 aa)
A0A1Z5RNG0DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2097 aa)
A0A1Z5RJL3Uncharacterized protein. (188 aa)
A0A1Z5RHS3Uncharacterized protein. (646 aa)
A0A1Z5RHK15'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (907 aa)
A0A1Z5RD95DRMBL domain-containing protein. (496 aa)
A0A1Z5RBA1DUF1618 domain-containing protein. (526 aa)
A0A1Z5R9P2Exonuclease domain-containing protein. (205 aa)
A0A1Z5R9815'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1058 aa)
A0A1Z5R8K6Exonuclease domain-containing protein. (258 aa)
A0A1Z5R8E7Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (629 aa)
A0A1Z5R255F-box domain-containing protein. (392 aa)
A0A1W0W0C8RNB domain-containing protein. (782 aa)
A0A1W0VZV3Uncharacterized protein. (836 aa)
A0A1W0VT72Uncharacterized protein. (203 aa)
A0A1W0VT47Uncharacterized protein. (163 aa)
A0A1W0VT36Uncharacterized protein. (301 aa)
A0A1B6QQM5DUF1618 domain-containing protein. (484 aa)
A0A1B6QQE5HRDC domain-containing protein. (715 aa)
A0A1B6QQB7Uncharacterized protein. (620 aa)
A0A1B6QNS7Macro domain-containing protein. (788 aa)
A0A1B6QNR0Exonuclease domain-containing protein. (315 aa)
A0A1B6QLX3Uncharacterized protein. (341 aa)
A0A1B6QKN7HRDC domain-containing protein. (901 aa)
A0A1B6QEJ2HRDC domain-containing protein. (993 aa)
A0A1B6QCQ5SAM domain-containing protein. (948 aa)
A0A1B6QA20Uncharacterized protein. (450 aa)
A0A1B6Q972S1 motif domain-containing protein. (885 aa)
A0A1B6Q6M5SAP domain-containing protein. (803 aa)
A0A1B6Q0J8DUF1618 domain-containing protein. (395 aa)
A0A1B6PSZ3Uncharacterized protein. (188 aa)
A0A1B6PPS55'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (805 aa)
A0A1B6PH96Uncharacterized protein. (336 aa)
A0A1B6PB81Uncharacterized protein. (346 aa)
A0A1B6P874F-box domain-containing protein. (412 aa)
A0A1B6P7U5F-box domain-containing protein. (428 aa)
A0A1B6P7T4F-box domain-containing protein. (422 aa)
A0A194YSF4U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (280 aa)
A0A194YRB7Uncharacterized protein. (449 aa)
A0A194YJ96Uncharacterized protein. (269 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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