(8 nodes) Protein prenylation network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Input:
	C5Y1U2_SORBI	Uncharacterized protein. (414 aa)
	C5YIP6_SORBI	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (342 aa)
	C5Z7U1_SORBI	Uncharacterized protein. (693 aa)
	A0A1B6Q2T8	Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. (559 aa)
	A0A1W0VW38	Uncharacterized protein. (344 aa)
	A0A1W0VZF0	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (487 aa)
	C5X5D5_SORBI	Uncharacterized protein. (326 aa)
	C5XRK3_SORBI	Uncharacterized protein. (421 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6Q2T8	C5XRK3_SORBI	A0A1B6Q2T8	C5XRK3	Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.	Uncharacterized protein.	0.961
A0A1B6Q2T8	C5Y1U2_SORBI	A0A1B6Q2T8	C5Y1U2	Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.	Uncharacterized protein.	0.961
A0A1B6Q2T8	C5YIP6_SORBI	A0A1B6Q2T8	C5YIP6	Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.986
A0A1B6Q2T8	C5Z7U1_SORBI	A0A1B6Q2T8	C5Z7U1	Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.	Uncharacterized protein.	0.981
A0A1W0VW38	A0A1W0VZF0	A0A1W0VW38	A0A1W0VZF0	Uncharacterized protein.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.491
A0A1W0VW38	C5X5D5_SORBI	A0A1W0VW38	C5X5D5	Uncharacterized protein.	Uncharacterized protein.	0.993
A0A1W0VZF0	A0A1W0VW38	A0A1W0VZF0	A0A1W0VW38	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Uncharacterized protein.	0.491
A0A1W0VZF0	C5X5D5_SORBI	A0A1W0VZF0	C5X5D5	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Uncharacterized protein.	0.999
C5X5D5_SORBI	A0A1W0VW38	C5X5D5	A0A1W0VW38	Uncharacterized protein.	Uncharacterized protein.	0.993
C5X5D5_SORBI	A0A1W0VZF0	C5X5D5	A0A1W0VZF0	Uncharacterized protein.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.999
C5X5D5_SORBI	C5YIP6_SORBI	C5X5D5	C5YIP6	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.570
C5XRK3_SORBI	A0A1B6Q2T8	C5XRK3	A0A1B6Q2T8	Uncharacterized protein.	Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.	0.961
C5XRK3_SORBI	C5YIP6_SORBI	C5XRK3	C5YIP6	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.974
C5Y1U2_SORBI	A0A1B6Q2T8	C5Y1U2	A0A1B6Q2T8	Uncharacterized protein.	Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.	0.961
C5Y1U2_SORBI	C5YIP6_SORBI	C5Y1U2	C5YIP6	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.974
C5YIP6_SORBI	A0A1B6Q2T8	C5YIP6	A0A1B6Q2T8	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.	0.986
C5YIP6_SORBI	C5X5D5_SORBI	C5YIP6	C5X5D5	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.570
C5YIP6_SORBI	C5XRK3_SORBI	C5YIP6	C5XRK3	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.974
C5YIP6_SORBI	C5Y1U2_SORBI	C5YIP6	C5Y1U2	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.974
C5YIP6_SORBI	C5Z7U1_SORBI	C5YIP6	C5Z7U1	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.987

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