STRINGSTRING
C5Z8N2_SORBI C5Z8N2_SORBI C5Z764_SORBI C5Z764_SORBI C5Z4K9_SORBI C5Z4K9_SORBI C5Z1R9_SORBI C5Z1R9_SORBI C5YY05_SORBI C5YY05_SORBI C5YX36_SORBI C5YX36_SORBI C5YP46_SORBI C5YP46_SORBI C5YN49_SORBI C5YN49_SORBI C5YIV2_SORBI C5YIV2_SORBI C5YHJ3_SORBI C5YHJ3_SORBI C5YAB1_SORBI C5YAB1_SORBI C5Y8Y9_SORBI C5Y8Y9_SORBI C5XWD2_SORBI C5XWD2_SORBI C5XTI0_SORBI C5XTI0_SORBI C5XM68_SORBI C5XM68_SORBI C5XH78_SORBI C5XH78_SORBI C5XFC2_SORBI C5XFC2_SORBI C5XCT9_SORBI C5XCT9_SORBI C5XAA0_SORBI C5XAA0_SORBI C5X8G4_SORBI C5X8G4_SORBI C5X3B3_SORBI C5X3B3_SORBI C5WX38_SORBI C5WX38_SORBI C5WX33_SORBI C5WX33_SORBI A0A1B6QLT1 A0A1B6QLT1 A0A1B6QJK2 A0A1B6QJK2 A0A1B6QGJ0 A0A1B6QGJ0 A0A1B6QEE4 A0A1B6QEE4 A0A1B6Q8E3 A0A1B6Q8E3 A0A1B6Q7R2 A0A1B6Q7R2 A0A1B6Q6C4 A0A1B6Q6C4 A0A1B6Q2W1 A0A1B6Q2W1 A0A1B6PN88 A0A1B6PN88 A0A1B6PLH0 A0A1B6PLH0 A0A194YP15 A0A194YP15 A0A194YRJ9 A0A194YRJ9 A0A1B6P9L1 A0A1B6P9L1 A0A1B6PC26 A0A1B6PC26 A0A1B6PCC0 A0A1B6PCC0 A0A194YL11 A0A194YL11 A0A194YLW3 A0A194YLW3 A0A194YML5 A0A194YML5 A0A1Z5S6Q5 A0A1Z5S6Q5 A0A1Z5S678 A0A1Z5S678 A0A1Z5S5K8 A0A1Z5S5K8 A0A1Z5S5I0 A0A1Z5S5I0 A0A1Z5RQS2 A0A1Z5RQS2 A0A1Z5RLY9 A0A1Z5RLY9 A0A1B6PCC7 A0A1B6PCC7 A0A1Z5RF01 A0A1Z5RF01 A0A1Z5REK7 A0A1Z5REK7 A0A1Z5RDX5 A0A1Z5RDX5 C5WWZ2_SORBI C5WWZ2_SORBI C5WVP1_SORBI C5WVP1_SORBI C5WT39_SORBI C5WT39_SORBI C5WRS0_SORBI C5WRS0_SORBI C5WRC3_SORBI C5WRC3_SORBI C5WR44_SORBI C5WR44_SORBI A0A1Z5S9D0 A0A1Z5S9D0 A0A1W0W6B9 A0A1W0W6B9 A0A1W0W2J7 A0A1W0W2J7 A0A1W0VU58 A0A1W0VU58 A0A1B6QQZ1 A0A1B6QQZ1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C5Z8N2_SORBIUncharacterized protein. (243 aa)
C5Z764_SORBIRNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1239 aa)
C5Z4K9_SORBIUncharacterized protein. (375 aa)
C5Z1R9_SORBIExonuclease domain-containing protein. (330 aa)
C5YY05_SORBIUncharacterized protein; Belongs to the argonaute family. (1109 aa)
C5YX36_SORBIUncharacterized protein. (909 aa)
C5YP46_SORBIUncharacterized protein. (198 aa)
C5YN49_SORBISuperoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (206 aa)
C5YIV2_SORBIRNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1220 aa)
C5YHJ3_SORBIDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1251 aa)
C5YAB1_SORBIUncharacterized protein. (63 aa)
C5Y8Y9_SORBIDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1239 aa)
C5XWD2_SORBISmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
C5XTI0_SORBIUncharacterized protein. (1149 aa)
C5XM68_SORBIRNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1207 aa)
C5XH78_SORBIUncharacterized protein. (898 aa)
C5XFC2_SORBIF-box domain-containing protein. (406 aa)
C5XCT9_SORBIDRBM domain-containing protein. (172 aa)
C5XAA0_SORBIUncharacterized protein. (942 aa)
C5X8G4_SORBIUncharacterized protein; Belongs to the argonaute family. (1044 aa)
C5X3B3_SORBINYN domain-containing protein. (654 aa)
C5WX38_SORBIUncharacterized protein; Belongs to the argonaute family. (849 aa)
C5WX33_SORBIPAZ domain-containing protein. (1012 aa)
A0A1B6QLT1Uncharacterized protein. (1619 aa)
A0A1B6QJK2Uncharacterized protein. (778 aa)
A0A1B6QGJ0Uncharacterized protein. (1243 aa)
A0A1B6QEE4Uncharacterized protein. (1285 aa)
A0A1B6Q8E3DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1577 aa)
A0A1B6Q7R2Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1657 aa)
A0A1B6Q6C4Uncharacterized protein. (504 aa)
A0A1B6Q2W1Uncharacterized protein. (900 aa)
A0A1B6PN88Uncharacterized protein; Belongs to the argonaute family. (1092 aa)
A0A1B6PLH0Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (134 aa)
A0A194YP15F-box domain-containing protein. (408 aa)
A0A194YRJ9Uncharacterized protein. (245 aa)
A0A1B6P9L1Uncharacterized protein. (376 aa)
A0A1B6PC26Uncharacterized protein. (1081 aa)
A0A1B6PCC0Uncharacterized protein; Belongs to the argonaute family. (881 aa)
A0A194YL11Uncharacterized protein; Belongs to the argonaute family. (981 aa)
A0A194YLW3Uncharacterized protein; Belongs to the argonaute family. (1048 aa)
A0A194YML5HTH OST-type domain-containing protein. (542 aa)
A0A1Z5S6Q5Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1637 aa)
A0A1Z5S678Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1386 aa)
A0A1Z5S5K8Uncharacterized protein; Belongs to the argonaute family. (743 aa)
A0A1Z5S5I0Uncharacterized protein; Belongs to the argonaute family. (884 aa)
A0A1Z5RQS2Uncharacterized protein; Belongs to the argonaute family. (1104 aa)
A0A1Z5RLY9DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2015 aa)
A0A1B6PCC7Uncharacterized protein. (531 aa)
A0A1Z5RF01Uncharacterized protein; Belongs to the argonaute family. (1077 aa)
A0A1Z5REK7DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1484 aa)
A0A1Z5RDX5Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1665 aa)
C5WWZ2_SORBIUncharacterized protein. (968 aa)
C5WVP1_SORBIUncharacterized protein; Belongs to the argonaute family. (1033 aa)
C5WT39_SORBICleavage and polyadenylation specificity factor subunit 2. (738 aa)
C5WRS0_SORBIDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1228 aa)
C5WRC3_SORBIUncharacterized protein. (1613 aa)
C5WR44_SORBIUncharacterized protein; Belongs to the argonaute family. (935 aa)
A0A1Z5S9D0NYN domain-containing protein. (1023 aa)
A0A1W0W6B9rRNA N-glycosidase. (1007 aa)
A0A1W0W2J7Uncharacterized protein; Belongs to the argonaute family. (881 aa)
A0A1W0VU58RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (901 aa)
A0A1B6QQZ1Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1929 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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