STRINGSTRING
A0A1B6QG83 A0A1B6QG83 A0A194YHL5 A0A194YHL5 A0A194YHT8 A0A194YHT8 A0A194YRU2 A0A194YRU2 A0A1B6QIP8 A0A1B6QIP8 A0A1B6QK03 A0A1B6QK03 A0A1B6QNF2 A0A1B6QNF2 A0A1B6P6H2 A0A1B6P6H2 A0A1B6PA07 A0A1B6PA07 A0A1B6PAM3 A0A1B6PAM3 A0A1B6PAS1 A0A1B6PAS1 A0A1B6PAY4 A0A1B6PAY4 A0A1B6PD05 A0A1B6PD05 A0A1B6PH22 A0A1B6PH22 A0A1W0VRK1 A0A1W0VRK1 A0A1W0VS20 A0A1W0VS20 A0A1W0VTB6 A0A1W0VTB6 A0A1W0VU42 A0A1W0VU42 A0A1W0W5J2 A0A1W0W5J2 A0A1W0W6T8 A0A1W0W6T8 A0A1B6PLV6 A0A1B6PLV6 A0A1B6PMX3 A0A1B6PMX3 A0A1B6PN14 A0A1B6PN14 A0A1B6PNC5 A0A1B6PNC5 Sb0199s002010 Sb0199s002010 C5Z8Q8_SORBI C5Z8Q8_SORBI C5Z8J0_SORBI C5Z8J0_SORBI C5Z8H6_SORBI C5Z8H6_SORBI C5Z7H8_SORBI C5Z7H8_SORBI C5Z466_SORBI C5Z466_SORBI C5Z3G3_SORBI C5Z3G3_SORBI C5Z1T1_SORBI C5Z1T1_SORBI C5Z1G2_SORBI C5Z1G2_SORBI C5Z0R9_SORBI C5Z0R9_SORBI C5YZQ9_SORBI C5YZQ9_SORBI C5YY43_SORBI C5YY43_SORBI C5YXG6_SORBI C5YXG6_SORBI C5YX28_SORBI C5YX28_SORBI C5YWW5_SORBI C5YWW5_SORBI C5YVX0_SORBI C5YVX0_SORBI C5YVJ6_SORBI C5YVJ6_SORBI C5YVH3_SORBI C5YVH3_SORBI C5YVD8_SORBI C5YVD8_SORBI C5YU77_SORBI C5YU77_SORBI C5YS24_SORBI C5YS24_SORBI C5YMX6_SORBI C5YMX6_SORBI EIF6-2 EIF6-2 C5YHC7_SORBI C5YHC7_SORBI C5YH93_SORBI C5YH93_SORBI C5YG68_SORBI C5YG68_SORBI C5YC29_SORBI C5YC29_SORBI C5YAD0_SORBI C5YAD0_SORBI C5Y2Z2_SORBI C5Y2Z2_SORBI C5XZE5_SORBI C5XZE5_SORBI C5XY61_SORBI C5XY61_SORBI C5XWF5_SORBI C5XWF5_SORBI C5XWF4_SORBI C5XWF4_SORBI C5XUB8_SORBI C5XUB8_SORBI C5XU89_SORBI C5XU89_SORBI C5XSJ0_SORBI C5XSJ0_SORBI C5XQP0_SORBI C5XQP0_SORBI C5XNY8_SORBI C5XNY8_SORBI C5XMQ1_SORBI C5XMQ1_SORBI C5XML8_SORBI C5XML8_SORBI A0A1B6PP92 A0A1B6PP92 A0A1B6PPU2 A0A1B6PPU2 A0A1B6PSE4 A0A1B6PSE4 A0A1B6PSZ2 A0A1B6PSZ2 A0A1B6Q3V1 A0A1B6Q3V1 A0A1B6Q872 A0A1B6Q872 A0A1B6Q8B8 A0A1B6Q8B8 A0A1B6Q8D1 A0A1B6Q8D1 A0A1W0W7Y6 A0A1W0W7Y6 A0A1Z5R8R9 A0A1Z5R8R9 A0A1Z5R933 A0A1Z5R933 A0A1Z5R9J1 A0A1Z5R9J1 A0A1Z5R9M6 A0A1Z5R9M6 A0A1Z5RCF5 A0A1Z5RCF5 A0A1Z5RE75 A0A1Z5RE75 A0A1Z5S4Q4 A0A1Z5S4Q4 A0A1Z5S5L2 A0A1Z5S5L2 A0A1Z5S8K0 A0A1Z5S8K0 A0A1Z5S8T6 A0A1Z5S8T6 A0A1Z5S9K1 A0A1Z5S9K1 A0A1Z5SBA3 A0A1Z5SBA3 rpl23-A rpl23-A rpl20 rpl20 rpl23-B rpl23-B C5WLW4_SORBI C5WLW4_SORBI C5WNV4_SORBI C5WNV4_SORBI C5WRK2_SORBI C5WRK2_SORBI A0A1B6Q8D4 A0A1B6Q8D4 C5XML6_SORBI C5XML6_SORBI C5XMJ8_SORBI C5XMJ8_SORBI C5XKB1_SORBI C5XKB1_SORBI C5XJT9_SORBI C5XJT9_SORBI C5XJ42_SORBI C5XJ42_SORBI C5XIN7_SORBI C5XIN7_SORBI EIF6 EIF6 C5XGC8_SORBI C5XGC8_SORBI C5XD79_SORBI C5XD79_SORBI C5XAM5_SORBI C5XAM5_SORBI C5X9C7_SORBI C5X9C7_SORBI A0A1B6QIP5 A0A1B6QIP5 A0A1B6Q8G1 A0A1B6Q8G1 A0A1B6QDS5 A0A1B6QDS5 C5X8H8_SORBI C5X8H8_SORBI C5X7L1_SORBI C5X7L1_SORBI C5X769_SORBI C5X769_SORBI C5X5Y7_SORBI C5X5Y7_SORBI C5X355_SORBI C5X355_SORBI C5X0P0_SORBI C5X0P0_SORBI C5WZW1_SORBI C5WZW1_SORBI C5WX15_SORBI C5WX15_SORBI C5WUN1_SORBI C5WUN1_SORBI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1B6QG83Uncharacterized protein. (260 aa)
A0A194YHL5Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
A0A194YHT8Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (669 aa)
A0A194YRU2Uncharacterized protein. (177 aa)
A0A1B6QIP8DUF4217 domain-containing protein. (72 aa)
A0A1B6QK03Uncharacterized protein. (753 aa)
A0A1B6QNF2Ribosomal_L16 domain-containing protein. (325 aa)
A0A1B6P6H2Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (382 aa)
A0A1B6PA07Uncharacterized protein. (439 aa)
A0A1B6PAM3Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (231 aa)
A0A1B6PAS1Uncharacterized protein. (586 aa)
A0A1B6PAY4Uncharacterized protein. (254 aa)
A0A1B6PD05Uncharacterized protein. (414 aa)
A0A1B6PH22Uncharacterized protein. (57 aa)
A0A1W0VRK1Uncharacterized protein. (88 aa)
A0A1W0VS20NOG1_N domain-containing protein. (180 aa)
A0A1W0VTB6RNA helicase. (599 aa)
A0A1W0VU42Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family. (166 aa)
A0A1W0W5J2OBG-type G domain-containing protein. (586 aa)
A0A1W0W6T8Uncharacterized protein. (721 aa)
A0A1B6PLV6Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (197 aa)
A0A1B6PMX3Ribosomal_L30_N domain-containing protein. (280 aa)
A0A1B6PN14Uncharacterized protein. (234 aa)
A0A1B6PNC5Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (833 aa)
Sb0199s002010Uncharacterized protein. (54 aa)
C5Z8Q8_SORBIC2H2-type domain-containing protein. (404 aa)
C5Z8J0_SORBIRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (150 aa)
C5Z8H6_SORBIUncharacterized protein. (95 aa)
C5Z7H8_SORBIUncharacterized protein. (273 aa)
C5Z466_SORBIUncharacterized protein. (410 aa)
C5Z3G3_SORBIBrix domain-containing protein. (362 aa)
C5Z1T1_SORBIUncharacterized protein. (198 aa)
C5Z1G2_SORBI50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (122 aa)
C5Z0R9_SORBIBrix domain-containing protein. (310 aa)
C5YZQ9_SORBIMidasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5436 aa)
C5YY43_SORBIMyb-like domain-containing protein. (441 aa)
C5YXG6_SORBIRibosomal protein; Belongs to the universal ribosomal protein uL1 family. (346 aa)
C5YX28_SORBIWD_REPEATS_REGION domain-containing protein. (479 aa)
C5YWW5_SORBIUncharacterized protein. (189 aa)
C5YVX0_SORBIPutative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (819 aa)
C5YVJ6_SORBITRASH domain-containing protein. (166 aa)
C5YVH3_SORBI60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (319 aa)
C5YVD8_SORBIUncharacterized protein. (112 aa)
C5YU77_SORBITPR_REGION domain-containing protein. (345 aa)
C5YS24_SORBIWD_REPEATS_REGION domain-containing protein. (330 aa)
C5YMX6_SORBI60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (319 aa)
EIF6-2Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
C5YHC7_SORBIUncharacterized protein. (457 aa)
C5YH93_SORBIUncharacterized protein. (262 aa)
C5YG68_SORBIUncharacterized protein. (2612 aa)
C5YC29_SORBIRibosomal_L14e domain-containing protein. (135 aa)
C5YAD0_SORBIUncharacterized protein. (219 aa)
C5Y2Z2_SORBIRibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (231 aa)
C5XZE5_SORBIRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (150 aa)
C5XY61_SORBIUncharacterized protein. (387 aa)
C5XWF5_SORBIBrix domain-containing protein. (323 aa)
C5XWF4_SORBI60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (219 aa)
C5XUB8_SORBI60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
C5XU89_SORBIUncharacterized protein. (112 aa)
C5XSJ0_SORBIUncharacterized protein. (123 aa)
C5XQP0_SORBIKOW domain-containing protein. (157 aa)
C5XNY8_SORBIHIT-type domain-containing protein. (151 aa)
C5XMQ1_SORBIRibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (330 aa)
C5XML8_SORBICLP1_P domain-containing protein. (388 aa)
A0A1B6PP92Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (300 aa)
A0A1B6PPU2Uncharacterized protein. (675 aa)
A0A1B6PSE4Uncharacterized protein. (57 aa)
A0A1B6PSZ2Uncharacterized protein. (57 aa)
A0A1B6Q3V1Uncharacterized protein. (102 aa)
A0A1B6Q872RRM domain-containing protein. (215 aa)
A0A1B6Q8B8Uncharacterized protein. (434 aa)
A0A1B6Q8D1Uncharacterized protein. (206 aa)
A0A1W0W7Y6Uncharacterized protein. (501 aa)
A0A1Z5R8R9Uncharacterized protein. (47 aa)
A0A1Z5R933NAM-associated domain-containing protein. (298 aa)
A0A1Z5R9J1Uncharacterized protein. (159 aa)
A0A1Z5R9M6Uncharacterized protein. (332 aa)
A0A1Z5RCF5CLP1_P domain-containing protein. (491 aa)
A0A1Z5RE75Uncharacterized protein. (251 aa)
A0A1Z5S4Q4Uncharacterized protein. (1016 aa)
A0A1Z5S5L2Uncharacterized protein. (228 aa)
A0A1Z5S8K0Uncharacterized protein. (358 aa)
A0A1Z5S8T6Myb-like domain-containing protein. (306 aa)
A0A1Z5S9K1Uncharacterized protein. (57 aa)
A0A1Z5SBA3S4 RNA-binding domain-containing protein. (407 aa)
rpl23-A50S ribosomal protein L23-A, chloroplastic; Binds to 23S rRNA. (96 aa)
rpl2050S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa)
rpl23-B50S ribosomal protein L23-B, chloroplastic; Binds to 23S rRNA. (93 aa)
C5WLW4_SORBIUncharacterized protein. (650 aa)
C5WNV4_SORBIPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (619 aa)
C5WRK2_SORBIRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
A0A1B6Q8D4Uncharacterized protein. (562 aa)
C5XML6_SORBIUncharacterized protein. (612 aa)
C5XMJ8_SORBIUncharacterized protein. (597 aa)
C5XKB1_SORBIUncharacterized protein. (604 aa)
C5XJT9_SORBIRibosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (681 aa)
C5XJ42_SORBI50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (121 aa)
C5XIN7_SORBIHIT-type domain-containing protein. (557 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (257 aa)
C5XGC8_SORBIProtein MAK16 homolog; Belongs to the MAK16 family. (284 aa)
C5XD79_SORBIRibosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (478 aa)
C5XAM5_SORBIUncharacterized protein. (112 aa)
C5X9C7_SORBIWD_REPEATS_REGION domain-containing protein. (478 aa)
A0A1B6QIP5Uncharacterized protein; Belongs to the DEAD box helicase family. (453 aa)
A0A1B6Q8G1Uncharacterized protein. (380 aa)
A0A1B6QDS5Uncharacterized protein. (212 aa)
C5X8H8_SORBIUncharacterized protein. (287 aa)
C5X7L1_SORBIRibosomal_L14e domain-containing protein. (134 aa)
C5X769_SORBIUncharacterized protein. (324 aa)
C5X5Y7_SORBIUncharacterized protein. (137 aa)
C5X355_SORBISAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (574 aa)
C5X0P0_SORBIBrix domain-containing protein. (348 aa)
C5WZW1_SORBIRibosomal_L18_c domain-containing protein. (302 aa)
C5WX15_SORBIRNA helicase. (623 aa)
C5WUN1_SORBIHIT-type domain-containing protein. (417 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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