(46 nodes) Cellular polysaccharide catabolic process network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

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protein homology

Your Input:
	C5XSV0_SORBI	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (428 aa)
	Sb24P17cg_130	Endoglucanase. (514 aa)
	C5XTD4_SORBI	Aamy domain-containing protein. (803 aa)
	C5XTL8_SORBI	Endoglucanase. (497 aa)
	C5XUQ6_SORBI	Endoglucanase. (535 aa)
	A0A1B6P668	Endoglucanase. (389 aa)
	A0A1B6PI12	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (438 aa)
	C5XZ77_SORBI	Endoglucanase. (758 aa)
	C5XZB0_SORBI	Endoglucanase. (504 aa)
	A0A1B6PJ17	Aamy domain-containing protein. (792 aa)
	A0A1B6PJH1	Uncharacterized protein. (964 aa)
	C5Y8W1_SORBI	Endoglucanase. (515 aa)
	C5YAG9_SORBI	Endoglucanase. (630 aa)
	C5YBG9_SORBI	Endoglucanase. (630 aa)
	C5YKM9_SORBI	Endoglucanase. (517 aa)
	C5YM15_SORBI	Endoglucanase. (502 aa)
	C5YMA9_SORBI	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (443 aa)
	C5YRM6_SORBI	Uncharacterized protein. (280 aa)
	C5YUQ8_SORBI	Endoglucanase. (627 aa)
	C5YXK3_SORBI	Aamy domain-containing protein. (800 aa)
	C5Z1V5_SORBI	Endoglucanase. (522 aa)
	C5Z808_SORBI	Endoglucanase. (562 aa)
	Sb1068s002010	Endoglucanase. (75 aa)
	Q9M6P8_SORBI	Seed starch branching enzyme. (832 aa)
	A0A1B6Q0Y5	Endoglucanase. (544 aa)
	A0A1B6Q5R0	Uncharacterized protein. (882 aa)
	A0A1B6QC58	Alpha-amylase. (850 aa)
	A0A1B6QCB0	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (412 aa)
	A0A1B6QD19	Aamy domain-containing protein. (776 aa)
	A0A1B6QFS0	4-alpha-glucanotransferase. (590 aa)
	A0A1B6QHW4	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (985 aa)
	A0A1B6QR46	TYR_PHOSPHATASE_2 domain-containing protein. (373 aa)
	A0A1W0VSD1	Endoglucanase. (441 aa)
	A0A1W0W606	Endoglucanase. (559 aa)
	A0A1Z5R9X3	Tyrosine-protein phosphatase domain-containing protein. (548 aa)
	A0A1Z5RCK4	Aamy domain-containing protein. (827 aa)
	A0A1Z5RGV6	Endoglucanase. (623 aa)
	C5X1C8_SORBI	Endoglucanase. (621 aa)
	C5X1P0_SORBI	Endoglucanase. (620 aa)
	C5X2B1_SORBI	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (437 aa)
	C5X689_SORBI	Endoglucanase. (525 aa)
	C5XC34_SORBI	Endoglucanase. (542 aa)
	C5XIT7_SORBI	Endoglucanase. (501 aa)
	C5XKE9_SORBI	Endoglucanase. (654 aa)
	C5XPV2_SORBI	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (838 aa)
	C5XSU8_SORBI	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (428 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6PI12	A0A1B6PJ17	A0A1B6PI12	A0A1B6PJ17	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	Aamy domain-containing protein.	0.904
A0A1B6PI12	A0A1B6PJH1	A0A1B6PI12	A0A1B6PJH1	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	Uncharacterized protein.	0.567
A0A1B6PI12	A0A1B6QD19	A0A1B6PI12	A0A1B6QD19	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	Aamy domain-containing protein.	0.915
A0A1B6PI12	A0A1B6QFS0	A0A1B6PI12	A0A1B6QFS0	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	4-alpha-glucanotransferase.	0.962
A0A1B6PI12	A0A1B6QHW4	A0A1B6PI12	A0A1B6QHW4	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.907
A0A1B6PI12	A0A1Z5RCK4	A0A1B6PI12	A0A1Z5RCK4	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	Aamy domain-containing protein.	0.879
A0A1B6PI12	C5XPV2_SORBI	A0A1B6PI12	C5XPV2	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.908
A0A1B6PI12	C5XTD4_SORBI	A0A1B6PI12	C5XTD4	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	Aamy domain-containing protein.	0.879
A0A1B6PI12	C5YXK3_SORBI	A0A1B6PI12	C5YXK3	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	Aamy domain-containing protein.	0.898
A0A1B6PI12	Q9M6P8_SORBI	A0A1B6PI12	Q9M6P8	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	Seed starch branching enzyme.	0.888
A0A1B6PJ17	A0A1B6PI12	A0A1B6PJ17	A0A1B6PI12	Aamy domain-containing protein.	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	0.904
A0A1B6PJ17	A0A1B6Q5R0	A0A1B6PJ17	A0A1B6Q5R0	Aamy domain-containing protein.	Uncharacterized protein.	0.925
A0A1B6PJ17	A0A1B6QC58	A0A1B6PJ17	A0A1B6QC58	Aamy domain-containing protein.	Alpha-amylase.	0.904
A0A1B6PJ17	A0A1B6QCB0	A0A1B6PJ17	A0A1B6QCB0	Aamy domain-containing protein.	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	0.688
A0A1B6PJ17	A0A1B6QD19	A0A1B6PJ17	A0A1B6QD19	Aamy domain-containing protein.	Aamy domain-containing protein.	0.909
A0A1B6PJ17	A0A1B6QFS0	A0A1B6PJ17	A0A1B6QFS0	Aamy domain-containing protein.	4-alpha-glucanotransferase.	0.984
A0A1B6PJ17	A0A1B6QHW4	A0A1B6PJ17	A0A1B6QHW4	Aamy domain-containing protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.992
A0A1B6PJ17	A0A1Z5RCK4	A0A1B6PJ17	A0A1Z5RCK4	Aamy domain-containing protein.	Aamy domain-containing protein.	0.948
A0A1B6PJ17	C5X2B1_SORBI	A0A1B6PJ17	C5X2B1	Aamy domain-containing protein.	Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.	0.904
A0A1B6PJ17	C5XPV2_SORBI	A0A1B6PJ17	C5XPV2	Aamy domain-containing protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.993

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