STRINGSTRING
C5WQK8_SORBI C5WQK8_SORBI C5WVZ0_SORBI C5WVZ0_SORBI C5XJL7_SORBI C5XJL7_SORBI C5XU46_SORBI C5XU46_SORBI C5XY75_SORBI C5XY75_SORBI C5YAL9_SORBI C5YAL9_SORBI C5YLC4_SORBI C5YLC4_SORBI CASP2_SORBI CASP2_SORBI C5Z3B1_SORBI C5Z3B1_SORBI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C5WQK8_SORBIUncharacterized protein. (524 aa)
C5WVZ0_SORBIPAP2_C domain-containing protein. (442 aa)
C5XJL7_SORBIGlycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (547 aa)
C5XU46_SORBIPAP2_C domain-containing protein. (445 aa)
C5XY75_SORBIUncharacterized protein. (573 aa)
C5YAL9_SORBIUncharacterized protein; Belongs to the CTL (choline transporter-like) family. (705 aa)
C5YLC4_SORBIUncharacterized protein; Belongs to the CTL (choline transporter-like) family. (711 aa)
CASP2_SORBICasparian strip membrane protein 2; Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity). (235 aa)
C5Z3B1_SORBIWD_REPEATS_REGION domain-containing protein. (402 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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