(28 nodes) Photoperiodism, flowering network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5Z5M8_SORBI	Uncharacterized protein. (291 aa)
	C5Z5M3_SORBI	Uncharacterized protein. (288 aa)
	C5Z2C5_SORBI	Photolyase/cryptochrome alpha/beta domain-containing protein. (654 aa)
	C5WVL6_SORBI	Uncharacterized protein. (274 aa)
	C5WVX6_SORBI	Peptidase S59 domain-containing protein. (1007 aa)
	C5XSX9_SORBI	Uncharacterized protein. (522 aa)
	C5WMU8_SORBI	Uncharacterized protein. (605 aa)
	C5WSH8_SORBI	Uncharacterized protein. (595 aa)
	A0A1Z5S9J1	MIF4G domain-containing protein. (867 aa)
	A0A1Z5R7K0	Protein kinase domain-containing protein. (617 aa)
	A0A1Z5R4C1	Peptidase S59 domain-containing protein. (856 aa)
	SORBI_K023900	Uncharacterized protein. (140 aa)
	A0A1B6QKP8	C2H2-type domain-containing protein. (428 aa)
	C5Z0Y9_SORBI	Uncharacterized protein. (609 aa)
	C5YWV9_SORBI	Uncharacterized protein. (385 aa)
	C5YPA1_SORBI	Fibronectin type-III domain-containing protein. (698 aa)
	C5YHA4_SORBI	HTH myb-type domain-containing protein. (747 aa)
	A0A1B6P6C1	Uncharacterized protein. (70 aa)
	C5YGZ1_SORBI	Uncharacterized protein. (601 aa)
	C5YAX6_SORBI	Peptidase S59 domain-containing protein. (943 aa)
	C5XTB5_SORBI	Uncharacterized protein. (416 aa)
	C5XT05_SORBI	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family. (468 aa)
	A0A1B6QDB3	BHLH domain-containing protein. (444 aa)
	A0A1B6Q7V2	Uncharacterized protein. (529 aa)
	A0A1B6Q642	Uncharacterized protein. (640 aa)
	A0A1B6Q0U9	Uncharacterized protein. (173 aa)
	A0A1B6P6M9	Fibronectin type-III domain-containing protein. (597 aa)
	A0A194YSG7	Uncharacterized protein. (695 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A194YSG7	C5YHA4_SORBI	A0A194YSG7	C5YHA4	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.416
A0A194YSG7	C5Z2C5_SORBI	A0A194YSG7	C5Z2C5	Uncharacterized protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.984
A0A1Z5R4C1	A0A1Z5S9J1	A0A1Z5R4C1	A0A1Z5S9J1	Peptidase S59 domain-containing protein.	MIF4G domain-containing protein.	0.589
A0A1Z5R4C1	C5YAX6_SORBI	A0A1Z5R4C1	C5YAX6	Peptidase S59 domain-containing protein.	Peptidase S59 domain-containing protein.	0.543
A0A1Z5S9J1	A0A1Z5R4C1	A0A1Z5S9J1	A0A1Z5R4C1	MIF4G domain-containing protein.	Peptidase S59 domain-containing protein.	0.589
A0A1Z5S9J1	C5WVX6_SORBI	A0A1Z5S9J1	C5WVX6	MIF4G domain-containing protein.	Peptidase S59 domain-containing protein.	0.589
A0A1Z5S9J1	C5YAX6_SORBI	A0A1Z5S9J1	C5YAX6	MIF4G domain-containing protein.	Peptidase S59 domain-containing protein.	0.589
A0A1Z5S9J1	C5YWV9_SORBI	A0A1Z5S9J1	C5YWV9	MIF4G domain-containing protein.	Uncharacterized protein.	0.859
C5WVL6_SORBI	C5YWV9_SORBI	C5WVL6	C5YWV9	Uncharacterized protein.	Uncharacterized protein.	0.479
C5WVX6_SORBI	A0A1Z5S9J1	C5WVX6	A0A1Z5S9J1	Peptidase S59 domain-containing protein.	MIF4G domain-containing protein.	0.589
C5WVX6_SORBI	C5YAX6_SORBI	C5WVX6	C5YAX6	Peptidase S59 domain-containing protein.	Peptidase S59 domain-containing protein.	0.915
C5XTB5_SORBI	C5YHA4_SORBI	C5XTB5	C5YHA4	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.485
C5YAX6_SORBI	A0A1Z5R4C1	C5YAX6	A0A1Z5R4C1	Peptidase S59 domain-containing protein.	Peptidase S59 domain-containing protein.	0.543
C5YAX6_SORBI	A0A1Z5S9J1	C5YAX6	A0A1Z5S9J1	Peptidase S59 domain-containing protein.	MIF4G domain-containing protein.	0.589
C5YAX6_SORBI	C5WVX6_SORBI	C5YAX6	C5WVX6	Peptidase S59 domain-containing protein.	Peptidase S59 domain-containing protein.	0.915
C5YHA4_SORBI	A0A194YSG7	C5YHA4	A0A194YSG7	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.416
C5YHA4_SORBI	C5XTB5_SORBI	C5YHA4	C5XTB5	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.485
C5YHA4_SORBI	C5Z2C5_SORBI	C5YHA4	C5Z2C5	HTH myb-type domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.511
C5YWV9_SORBI	A0A1Z5S9J1	C5YWV9	A0A1Z5S9J1	Uncharacterized protein.	MIF4G domain-containing protein.	0.859
C5YWV9_SORBI	C5WVL6_SORBI	C5YWV9	C5WVL6	Uncharacterized protein.	Uncharacterized protein.	0.479

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