(16 nodes) RNA polymerase V complex network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Others

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protein homology

Your Input:
	C5X7D7_SORBI	RPOLD domain-containing protein. (328 aa)
	A0A194YKD4	Uncharacterized protein. (130 aa)
	A0A194YRJ9	Uncharacterized protein. (245 aa)
	A0A1B6PFB3	Uncharacterized protein. (970 aa)
	A0A1B6PTV6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (115 aa)
	A0A1B6Q0M1	Uncharacterized protein. (405 aa)
	A0A1B6QR11	Uncharacterized protein. (186 aa)
	A0A1W0VTZ3	Uncharacterized protein. (218 aa)
	A0A1W0W763	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
	C5WRS0_SORBI	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1228 aa)
	C5WWU8_SORBI	Uncharacterized protein. (945 aa)
	C5Y4H1_SORBI	Uncharacterized protein. (263 aa)
	C5Y8Y9_SORBI	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1239 aa)
	C5YC89_SORBI	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
	C5YHJ3_SORBI	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1251 aa)
	C5YZB6_SORBI	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A194YKD4	A0A1B6PFB3	A0A194YKD4	A0A1B6PFB3	Uncharacterized protein.	Uncharacterized protein.	0.752
A0A194YKD4	A0A1B6Q0M1	A0A194YKD4	A0A1B6Q0M1	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A194YKD4	A0A1B6QR11	A0A194YKD4	A0A1B6QR11	Uncharacterized protein.	Uncharacterized protein.	0.752
A0A194YKD4	C5WWU8_SORBI	A0A194YKD4	C5WWU8	Uncharacterized protein.	Uncharacterized protein.	0.752
A0A194YRJ9	A0A1B6PFB3	A0A194YRJ9	A0A1B6PFB3	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A194YRJ9	A0A1B6PTV6	A0A194YRJ9	A0A1B6PTV6	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.822
A0A194YRJ9	A0A1B6QR11	A0A194YRJ9	A0A1B6QR11	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A194YRJ9	A0A1W0W763	A0A194YRJ9	A0A1W0W763	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.822
A0A194YRJ9	C5WRS0_SORBI	A0A194YRJ9	C5WRS0	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.774
A0A194YRJ9	C5WWU8_SORBI	A0A194YRJ9	C5WWU8	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A194YRJ9	C5X7D7_SORBI	A0A194YRJ9	C5X7D7	Uncharacterized protein.	RPOLD domain-containing protein.	0.963
A0A194YRJ9	C5Y4H1_SORBI	A0A194YRJ9	C5Y4H1	Uncharacterized protein.	Uncharacterized protein.	0.934
A0A194YRJ9	C5Y8Y9_SORBI	A0A194YRJ9	C5Y8Y9	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.774
A0A194YRJ9	C5YC89_SORBI	A0A194YRJ9	C5YC89	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.822
A0A194YRJ9	C5YHJ3_SORBI	A0A194YRJ9	C5YHJ3	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.774
A0A194YRJ9	C5YZB6_SORBI	A0A194YRJ9	C5YZB6	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.822
A0A1B6PFB3	A0A194YKD4	A0A1B6PFB3	A0A194YKD4	Uncharacterized protein.	Uncharacterized protein.	0.752
A0A1B6PFB3	A0A194YRJ9	A0A1B6PFB3	A0A194YRJ9	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A1B6PFB3	A0A1B6Q0M1	A0A1B6PFB3	A0A1B6Q0M1	Uncharacterized protein.	Uncharacterized protein.	0.868
A0A1B6PFB3	A0A1W0VTZ3	A0A1B6PFB3	A0A1W0VTZ3	Uncharacterized protein.	Uncharacterized protein.	0.752

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