(20 nodes) Cytoplasmic stress granule network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	A0A1B6QFA5	Uncharacterized protein. (439 aa)
	A0A1B6QCZ3	Uncharacterized protein. (438 aa)
	C5YRP5_SORBI	DEAD domain-containing protein. (529 aa)
	C5YWP4_SORBI	3'-5' exonuclease domain-containing protein. (562 aa)
	C5Z9C7_SORBI	Uncharacterized protein. (114 aa)
	A0A1Z5RPC1	Uncharacterized protein. (1190 aa)
	A0A1Z5S8J3	2-Hacid_dh_C domain-containing protein. (717 aa)
	A0A1Z5SBV7	2-Hacid_dh_C domain-containing protein. (866 aa)
	C5WQC5_SORBI	FLZ-type domain-containing protein. (314 aa)
	C5WRV8_SORBI	HTH La-type RNA-binding domain-containing protein. (449 aa)
	A0A1Z5RNJ3	LsmAD domain-containing protein. (605 aa)
	C5WVW4_SORBI	Uncharacterized protein. (415 aa)
	C5WWE0_SORBI	Uncharacterized protein; Belongs to the DEAD box helicase family. (507 aa)
	C5WWE1_SORBI	Uncharacterized protein; Belongs to the DEAD box helicase family. (507 aa)
	C5WX87_SORBI	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (990 aa)
	C5WXS7_SORBI	Uncharacterized protein. (499 aa)
	C5XMP1_SORBI	FLZ-type domain-containing protein. (284 aa)
	C5Y9C4_SORBI	Uncharacterized protein. (423 aa)
	C5YBZ2_SORBI	Uncharacterized protein. (443 aa)
	C5YG86_SORBI	Uncharacterized protein. (456 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6QFA5	A0A1Z5RNJ3	A0A1B6QFA5	A0A1Z5RNJ3	Uncharacterized protein.	LsmAD domain-containing protein.	0.479
A0A1Z5RNJ3	A0A1B6QFA5	A0A1Z5RNJ3	A0A1B6QFA5	LsmAD domain-containing protein.	Uncharacterized protein.	0.479
A0A1Z5RNJ3	C5WWE0_SORBI	A0A1Z5RNJ3	C5WWE0	LsmAD domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.933
A0A1Z5RNJ3	C5WWE1_SORBI	A0A1Z5RNJ3	C5WWE1	LsmAD domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.933
A0A1Z5RNJ3	C5YBZ2_SORBI	A0A1Z5RNJ3	C5YBZ2	LsmAD domain-containing protein.	Uncharacterized protein.	0.479
A0A1Z5RPC1	C5WWE0_SORBI	A0A1Z5RPC1	C5WWE0	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.433
A0A1Z5RPC1	C5WWE1_SORBI	A0A1Z5RPC1	C5WWE1	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.433
C5WWE0_SORBI	A0A1Z5RNJ3	C5WWE0	A0A1Z5RNJ3	Uncharacterized protein; Belongs to the DEAD box helicase family.	LsmAD domain-containing protein.	0.933
C5WWE0_SORBI	A0A1Z5RPC1	C5WWE0	A0A1Z5RPC1	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.433
C5WWE0_SORBI	C5WWE1_SORBI	C5WWE0	C5WWE1	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.900
C5WWE1_SORBI	A0A1Z5RNJ3	C5WWE1	A0A1Z5RNJ3	Uncharacterized protein; Belongs to the DEAD box helicase family.	LsmAD domain-containing protein.	0.933
C5WWE1_SORBI	A0A1Z5RPC1	C5WWE1	A0A1Z5RPC1	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.433
C5WWE1_SORBI	C5WWE0_SORBI	C5WWE1	C5WWE0	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.900
C5YBZ2_SORBI	A0A1Z5RNJ3	C5YBZ2	A0A1Z5RNJ3	Uncharacterized protein.	LsmAD domain-containing protein.	0.479

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