STRINGSTRING
C5XZA4_SORBI C5XZA4_SORBI A0A194YQM4 A0A194YQM4 A0A1W0VSC1 A0A1W0VSC1 C5XIK7_SORBI C5XIK7_SORBI C5XZA3_SORBI C5XZA3_SORBI C5YAM8_SORBI C5YAM8_SORBI C5Z7Z3_SORBI C5Z7Z3_SORBI C5Z7Z4_SORBI C5Z7Z4_SORBI C5Z7Z5_SORBI C5Z7Z5_SORBI C5Z7Z7_SORBI C5Z7Z7_SORBI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C5XZA4_SORBIEF-hand domain-containing protein. (229 aa)
A0A194YQM4Uncharacterized protein. (1004 aa)
A0A1W0VSC1Uncharacterized protein. (227 aa)
C5XIK7_SORBIDNA_mis_repair domain-containing protein. (721 aa)
C5XZA3_SORBIEF-hand domain-containing protein. (222 aa)
C5YAM8_SORBIDNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1100 aa)
C5Z7Z3_SORBIUncharacterized protein. (228 aa)
C5Z7Z4_SORBIEF-hand domain-containing protein. (219 aa)
C5Z7Z5_SORBIEF-hand domain-containing protein. (213 aa)
C5Z7Z7_SORBIUncharacterized protein. (213 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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