(36 nodes) Endoribonuclease complex network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5Y243_SORBI	SQHop_cyclase_N domain-containing protein. (199 aa)
	C5YGW6_SORBI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (758 aa)
	C5YIX2_SORBI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (762 aa)
	C5YRW6_SORBI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (758 aa)
	C5Z996_SORBI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (734 aa)
	C5Z9E5_SORBI	Uncharacterized protein. (152 aa)
	A0A1B6PR67	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (766 aa)
	A0A1B6PGI7	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (793 aa)
	A0A1B6PE51	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (757 aa)
	A0A1B6PBC8	Uncharacterized protein. (719 aa)
	A0A1B6P8Y7	POP4 domain-containing protein. (345 aa)
	A0A194YMN3	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (643 aa)
	A0A194YM52	SQHop_cyclase_C domain-containing protein. (82 aa)
	A0A194YJC4	POP4 domain-containing protein. (322 aa)
	A0A1B6QGG3	Uncharacterized protein. (854 aa)
	A0A1W0VUT7	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (663 aa)
	A0A1W0VV94	tRNA_int_endo domain-containing protein. (307 aa)
	A0A1W0W5W9	tRNA_int_end_N2 domain-containing protein. (273 aa)
	A0A1Z5R8U5	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (728 aa)
	A0A1Z5R9T6	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (753 aa)
	A0A1Z5RGI2	Uncharacterized protein. (131 aa)
	A0A1Z5RGN0	Uncharacterized protein. (725 aa)
	A0A1Z5RGU8	PRORP domain-containing protein. (77 aa)
	A0A1Z5RM09	Uncharacterized protein. (729 aa)
	A0A1Z5S675	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (794 aa)
	C5XUK6_SORBI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (739 aa)
	C5XUJ6_SORBI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (757 aa)
	C5XUJ5_SORBI	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (761 aa)
	C5XP44_SORBI	Uncharacterized protein. (458 aa)
	C5XMJ8_SORBI	Uncharacterized protein. (597 aa)
	C5X1S8_SORBI	BPL/LPL catalytic domain-containing protein. (244 aa)
	A0A1B6PRM0	SQHop_cyclase_C domain-containing protein. (275 aa)
	A0A1B6PSZ6	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (766 aa)
	A0A1B6Q183	tRNA_int_end_N2 domain-containing protein. (262 aa)
	A0A1B6Q205	Lactamase_B domain-containing protein. (517 aa)
	A0A1B6QB99	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (631 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A194YJC4	A0A1B6P8Y7	A0A194YJC4	A0A1B6P8Y7	POP4 domain-containing protein.	POP4 domain-containing protein.	0.900
A0A194YJC4	A0A1B6PBC8	A0A194YJC4	A0A1B6PBC8	POP4 domain-containing protein.	Uncharacterized protein.	0.995
A0A194YJC4	A0A1B6Q183	A0A194YJC4	A0A1B6Q183	POP4 domain-containing protein.	tRNA_int_end_N2 domain-containing protein.	0.559
A0A194YJC4	A0A1B6QGG3	A0A194YJC4	A0A1B6QGG3	POP4 domain-containing protein.	Uncharacterized protein.	0.996
A0A194YJC4	A0A1W0VV94	A0A194YJC4	A0A1W0VV94	POP4 domain-containing protein.	tRNA_int_endo domain-containing protein.	0.597
A0A194YJC4	A0A1W0W5W9	A0A194YJC4	A0A1W0W5W9	POP4 domain-containing protein.	tRNA_int_end_N2 domain-containing protein.	0.559
A0A194YJC4	A0A1Z5RGN0	A0A194YJC4	A0A1Z5RGN0	POP4 domain-containing protein.	Uncharacterized protein.	0.995
A0A194YJC4	A0A1Z5RGU8	A0A194YJC4	A0A1Z5RGU8	POP4 domain-containing protein.	PRORP domain-containing protein.	0.901
A0A194YJC4	A0A1Z5RM09	A0A194YJC4	A0A1Z5RM09	POP4 domain-containing protein.	Uncharacterized protein.	0.901
A0A194YJC4	C5XMJ8_SORBI	A0A194YJC4	C5XMJ8	POP4 domain-containing protein.	Uncharacterized protein.	0.416
A0A194YJC4	C5Z9E5_SORBI	A0A194YJC4	C5Z9E5	POP4 domain-containing protein.	Uncharacterized protein.	0.949
A0A194YM52	C5XUK6_SORBI	A0A194YM52	C5XUK6	SQHop_cyclase_C domain-containing protein.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.517
A0A194YM52	C5Y243_SORBI	A0A194YM52	C5Y243	SQHop_cyclase_C domain-containing protein.	SQHop_cyclase_N domain-containing protein.	0.520
A0A1B6P8Y7	A0A194YJC4	A0A1B6P8Y7	A0A194YJC4	POP4 domain-containing protein.	POP4 domain-containing protein.	0.900
A0A1B6P8Y7	A0A1B6PBC8	A0A1B6P8Y7	A0A1B6PBC8	POP4 domain-containing protein.	Uncharacterized protein.	0.995
A0A1B6P8Y7	A0A1B6Q183	A0A1B6P8Y7	A0A1B6Q183	POP4 domain-containing protein.	tRNA_int_end_N2 domain-containing protein.	0.559
A0A1B6P8Y7	A0A1B6QGG3	A0A1B6P8Y7	A0A1B6QGG3	POP4 domain-containing protein.	Uncharacterized protein.	0.996
A0A1B6P8Y7	A0A1W0VV94	A0A1B6P8Y7	A0A1W0VV94	POP4 domain-containing protein.	tRNA_int_endo domain-containing protein.	0.597
A0A1B6P8Y7	A0A1W0W5W9	A0A1B6P8Y7	A0A1W0W5W9	POP4 domain-containing protein.	tRNA_int_end_N2 domain-containing protein.	0.559
A0A1B6P8Y7	A0A1Z5RGN0	A0A1B6P8Y7	A0A1Z5RGN0	POP4 domain-containing protein.	Uncharacterized protein.	0.995

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