(13 nodes) Pre-ATP-grasp domain superfamily network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5XNR5_SORBI	Uncharacterized protein. (1171 aa)
	C5YUU7_SORBI	ATP-grasp domain-containing protein. (521 aa)
	C5YD68_SORBI	Uncharacterized protein. (2326 aa)
	C5Y887_SORBI	ATP-grasp domain-containing protein. (525 aa)
	C5Y710_SORBI	Glutathione synthetase. (532 aa)
	C5XLT6_SORBI	ATP-grasp domain-containing protein. (542 aa)
	C5X6B3_SORBI	ATP-grasp domain-containing protein. (781 aa)
	A0A1Z5S7N4	Uncharacterized protein. (1877 aa)
	A0A1Z5R7X6	Uncharacterized protein. (752 aa)
	A0A1Z5R621	ATP-grasp domain-containing protein. (526 aa)
	A0A1B6Q8Z7	Uncharacterized protein. (1044 aa)
	A0A1B6PD09	Uncharacterized protein. (2265 aa)
	A0A1B6PCZ5	Glutathione synthetase. (476 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6PCZ5	C5Y710_SORBI	A0A1B6PCZ5	C5Y710	Glutathione synthetase.	Glutathione synthetase.	0.901
A0A1B6PD09	A0A1Z5R621	A0A1B6PD09	A0A1Z5R621	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.454
A0A1B6PD09	A0A1Z5R7X6	A0A1B6PD09	A0A1Z5R7X6	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A1B6PD09	C5XLT6_SORBI	A0A1B6PD09	C5XLT6	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.476
A0A1B6PD09	C5XNR5_SORBI	A0A1B6PD09	C5XNR5	Uncharacterized protein.	Uncharacterized protein.	0.579
A0A1B6PD09	C5Y887_SORBI	A0A1B6PD09	C5Y887	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.454
A0A1B6PD09	C5YD68_SORBI	A0A1B6PD09	C5YD68	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A1B6PD09	C5YUU7_SORBI	A0A1B6PD09	C5YUU7	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.454
A0A1Z5R621	A0A1B6PD09	A0A1Z5R621	A0A1B6PD09	ATP-grasp domain-containing protein.	Uncharacterized protein.	0.454
A0A1Z5R621	A0A1Z5S7N4	A0A1Z5R621	A0A1Z5S7N4	ATP-grasp domain-containing protein.	Uncharacterized protein.	0.454
A0A1Z5R621	C5XLT6_SORBI	A0A1Z5R621	C5XLT6	ATP-grasp domain-containing protein.	ATP-grasp domain-containing protein.	0.920
A0A1Z5R621	C5XNR5_SORBI	A0A1Z5R621	C5XNR5	ATP-grasp domain-containing protein.	Uncharacterized protein.	0.627
A0A1Z5R621	C5Y887_SORBI	A0A1Z5R621	C5Y887	ATP-grasp domain-containing protein.	ATP-grasp domain-containing protein.	0.901
A0A1Z5R621	C5YD68_SORBI	A0A1Z5R621	C5YD68	ATP-grasp domain-containing protein.	Uncharacterized protein.	0.454
A0A1Z5R621	C5YUU7_SORBI	A0A1Z5R621	C5YUU7	ATP-grasp domain-containing protein.	ATP-grasp domain-containing protein.	0.901
A0A1Z5R7X6	A0A1B6PD09	A0A1Z5R7X6	A0A1B6PD09	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A1Z5R7X6	A0A1Z5S7N4	A0A1Z5R7X6	A0A1Z5S7N4	Uncharacterized protein.	Uncharacterized protein.	0.807
A0A1Z5R7X6	C5XNR5_SORBI	A0A1Z5R7X6	C5XNR5	Uncharacterized protein.	Uncharacterized protein.	0.629
A0A1Z5R7X6	C5YD68_SORBI	A0A1Z5R7X6	C5YD68	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A1Z5S7N4	A0A1Z5R621	A0A1Z5S7N4	A0A1Z5R621	Uncharacterized protein.	ATP-grasp domain-containing protein.	0.454

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