(91 nodes) Zinc finger, RING-type, conserved site network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A194YHU9	Uncharacterized protein. (406 aa)
	A0A194YIW9	Uncharacterized protein. (370 aa)
	A0A194YQZ7	Uncharacterized protein. (422 aa)
	A0A194YRZ6	RBR-type E3 ubiquitin transferase. (602 aa)
	A0A194YSG7	Uncharacterized protein. (695 aa)
	A0A1B6P8P3	Uncharacterized protein. (1627 aa)
	A0A1B6P9L3	RING-type domain-containing protein. (497 aa)
	A0A1B6PDL1	Uncharacterized protein. (1102 aa)
	A0A1B6PEA7	RING-type domain-containing protein. (338 aa)
	A0A1B6PFW0	RING-type domain-containing protein. (407 aa)
	A0A1B6PFX8	Uncharacterized protein. (1022 aa)
	A0A1B6PMS5	RBR-type E3 ubiquitin transferase. (574 aa)
	A0A1B6PMW9	RING-type domain-containing protein. (485 aa)
	A0A1B6PP70	RING-type domain-containing protein. (255 aa)
	A0A1B6Q1I2	RING-type domain-containing protein. (424 aa)
	A0A1B6Q2I0	RING-type domain-containing protein. (383 aa)
	A0A1B6Q4T6	RING-type domain-containing protein. (1139 aa)
	A0A1B6Q6T9	RING-type domain-containing protein. (577 aa)
	A0A1B6Q892	Uncharacterized protein. (1263 aa)
	A0A1B6Q9E2	RING-type domain-containing protein. (534 aa)
	A0A1B6QAD3	RING-type domain-containing protein. (253 aa)
	A0A1B6QC36	RING-type domain-containing protein. (277 aa)
	A0A1B6QE31	RBR-type E3 ubiquitin transferase. (550 aa)
	A0A1B6QHH5	RING-type domain-containing protein. (388 aa)
	A0A1B6QI43	RING-type domain-containing protein. (488 aa)
	A0A1B6QJ86	RING-type domain-containing protein. (516 aa)
	A0A1B6QMF0	Uncharacterized protein. (479 aa)
	A0A1W0VZX5	Uncharacterized protein. (1260 aa)
	A0A1W0W106	RING-type domain-containing protein. (255 aa)
	A0A1W0W3W6	Uncharacterized protein. (516 aa)
	A0A1W0W558	RBR-type E3 ubiquitin transferase. (801 aa)
	A0A1W0W590	RBR-type E3 ubiquitin transferase. (573 aa)
	A0A1W0W5D1	RBR-type E3 ubiquitin transferase. (514 aa)
	A0A1W0W5D2	RBR-type E3 ubiquitin transferase. (310 aa)
	A0A1W0W5X0	RING-type domain-containing protein. (208 aa)
	A0A1W0W7A8	Uncharacterized protein. (1517 aa)
	A0A1W0W7D2	RING-type domain-containing protein. (445 aa)
	A0A1Z5R714	RING-type domain-containing protein. (552 aa)
	A0A1Z5R856	RING-type domain-containing protein. (207 aa)
	A0A1Z5RBM3	RING-type domain-containing protein. (479 aa)
	A0A1Z5RKR7	RBR-type E3 ubiquitin transferase. (533 aa)
	A0A1Z5RP22	Uncharacterized protein. (371 aa)
	A0A1Z5S5Q8	Uncharacterized protein. (356 aa)
	A0A1Z5S6Q2	RING-type domain-containing protein. (466 aa)
	A0A1Z5S9J7	E3 ubiquitin protein ligase. (964 aa)
	A0A1Z5S9X8	Uncharacterized protein. (807 aa)
	C5WPP0_SORBI	RING-type domain-containing protein. (229 aa)
	C5WQL8_SORBI	RING-type domain-containing protein. (435 aa)
	C5WT38_SORBI	RING-type domain-containing protein. (191 aa)
	C5WTN7_SORBI	RING-type domain-containing protein. (261 aa)
	C5WUM2_SORBI	Uncharacterized protein. (520 aa)
	C5WWH5_SORBI	RING-type domain-containing protein. (267 aa)
	C5WX89_SORBI	RING-type domain-containing protein. (242 aa)
	C5WXC1_SORBI	C2H2-type domain-containing protein. (480 aa)
	C5X3F0_SORBI	Uncharacterized protein. (822 aa)
	C5X4N8_SORBI	RING-type domain-containing protein. (198 aa)
	C5X4S8_SORBI	RING-type domain-containing protein. (242 aa)
	C5X561_SORBI	RBR-type E3 ubiquitin transferase. (240 aa)
	C5X6D4_SORBI	RING-type domain-containing protein. (388 aa)
	C5X9Y6_SORBI	Uncharacterized protein. (857 aa)
	C5XCV3_SORBI	RBR-type E3 ubiquitin transferase. (319 aa)
	C5XG94_SORBI	RING-type domain-containing protein. (242 aa)
	C5XIH0_SORBI	RING-type domain-containing protein. (278 aa)
	C5XIT4_SORBI	RING-type domain-containing protein. (474 aa)
	C5XLU4_SORBI	Uncharacterized protein. (823 aa)
	C5XME8_SORBI	RING-type domain-containing protein. (472 aa)
	C5XT84_SORBI	RING-type domain-containing protein. (742 aa)
	C5XTC7_SORBI	Uncharacterized protein. (1024 aa)
	C5XTW4_SORBI	Uncharacterized protein. (1252 aa)
	C5XUC8_SORBI	Uncharacterized protein. (497 aa)
	C5XYA1_SORBI	RING-type domain-containing protein. (254 aa)
	C5XZF5_SORBI	Uncharacterized protein. (330 aa)
	C5Y2X0_SORBI	RBR-type E3 ubiquitin transferase. (548 aa)
	C5Y7I0_SORBI	RBR-type E3 ubiquitin transferase. (657 aa)
	C5YCL1_SORBI	RING-type domain-containing protein. (260 aa)
	C5YD60_SORBI	Uncharacterized protein. (1174 aa)
	C5YF19_SORBI	RBR-type E3 ubiquitin transferase. (649 aa)
	C5YGK0_SORBI	Uncharacterized protein. (655 aa)
	C5YGK3_SORBI	Uncharacterized protein. (1020 aa)
	C5YJS4_SORBI	Uncharacterized protein. (483 aa)
	C5YKV1_SORBI	Uncharacterized protein. (518 aa)
	C5YLS5_SORBI	RBR-type E3 ubiquitin transferase. (326 aa)
	C5YLW5_SORBI	RING-type domain-containing protein. (382 aa)
	C5YSW8_SORBI	RBR-type E3 ubiquitin transferase. (510 aa)
	C5YT07_SORBI	RING-type domain-containing protein. (232 aa)
	C5YVP6_SORBI	RING-type domain-containing protein. (452 aa)
	C5YXY0_SORBI	Uncharacterized protein. (773 aa)
	C5YZE6_SORBI	RING-type domain-containing protein. (551 aa)
	C5Z0U2_SORBI	Uncharacterized protein. (996 aa)
	C5Z8M1_SORBI	Uncharacterized protein. (776 aa)
	C5Z8U7_SORBI	E3 ubiquitin protein ligase. (851 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A194YQZ7	A0A194YSG7	A0A194YQZ7	A0A194YSG7	Uncharacterized protein.	Uncharacterized protein.	0.663
A0A194YQZ7	A0A1B6P8P3	A0A194YQZ7	A0A1B6P8P3	Uncharacterized protein.	Uncharacterized protein.	0.777
A0A194YQZ7	A0A1B6Q4T6	A0A194YQZ7	A0A1B6Q4T6	Uncharacterized protein.	RING-type domain-containing protein.	0.663
A0A194YQZ7	A0A1W0W7D2	A0A194YQZ7	A0A1W0W7D2	Uncharacterized protein.	RING-type domain-containing protein.	0.537
A0A194YSG7	A0A194YQZ7	A0A194YSG7	A0A194YQZ7	Uncharacterized protein.	Uncharacterized protein.	0.663
A0A194YSG7	A0A1B6P8P3	A0A194YSG7	A0A1B6P8P3	Uncharacterized protein.	Uncharacterized protein.	0.738
A0A1B6P8P3	A0A194YQZ7	A0A1B6P8P3	A0A194YQZ7	Uncharacterized protein.	Uncharacterized protein.	0.777
A0A1B6P8P3	A0A194YSG7	A0A1B6P8P3	A0A194YSG7	Uncharacterized protein.	Uncharacterized protein.	0.738
A0A1B6P8P3	A0A1B6Q4T6	A0A1B6P8P3	A0A1B6Q4T6	Uncharacterized protein.	RING-type domain-containing protein.	0.738
A0A1B6P8P3	A0A1Z5S5Q8	A0A1B6P8P3	A0A1Z5S5Q8	Uncharacterized protein.	Uncharacterized protein.	0.484
A0A1B6P9L3	A0A1B6Q9E2	A0A1B6P9L3	A0A1B6Q9E2	RING-type domain-containing protein.	RING-type domain-containing protein.	0.800
A0A1B6P9L3	A0A1B6QHH5	A0A1B6P9L3	A0A1B6QHH5	RING-type domain-containing protein.	RING-type domain-containing protein.	0.816
A0A1B6P9L3	A0A1B6QI43	A0A1B6P9L3	A0A1B6QI43	RING-type domain-containing protein.	RING-type domain-containing protein.	0.851
A0A1B6P9L3	A0A1B6QJ86	A0A1B6P9L3	A0A1B6QJ86	RING-type domain-containing protein.	RING-type domain-containing protein.	0.818
A0A1B6P9L3	A0A1Z5R714	A0A1B6P9L3	A0A1Z5R714	RING-type domain-containing protein.	RING-type domain-containing protein.	0.800
A0A1B6PMW9	A0A1B6Q9E2	A0A1B6PMW9	A0A1B6Q9E2	RING-type domain-containing protein.	RING-type domain-containing protein.	0.800
A0A1B6PMW9	A0A1B6QHH5	A0A1B6PMW9	A0A1B6QHH5	RING-type domain-containing protein.	RING-type domain-containing protein.	0.814
A0A1B6PMW9	A0A1B6QI43	A0A1B6PMW9	A0A1B6QI43	RING-type domain-containing protein.	RING-type domain-containing protein.	0.800
A0A1B6PMW9	A0A1B6QJ86	A0A1B6PMW9	A0A1B6QJ86	RING-type domain-containing protein.	RING-type domain-containing protein.	0.800
A0A1B6PMW9	A0A1Z5R714	A0A1B6PMW9	A0A1Z5R714	RING-type domain-containing protein.	RING-type domain-containing protein.	0.800

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