STRINGSTRING
C5XWJ8_SORBI C5XWJ8_SORBI A0A194YMM6 A0A194YMM6 A0A1B6P664 A0A1B6P664 A0A1B6PF49 A0A1B6PF49 A0A1B6PLD2 A0A1B6PLD2 A0A1B6QHW4 A0A1B6QHW4 A0A1B6QQR5 A0A1B6QQR5 rps19 rps19 rpl23-A rpl23-A rpl14 rpl14 rpl23-B rpl23-B C5WSV4_SORBI C5WSV4_SORBI C5XPV2_SORBI C5XPV2_SORBI C5XW45_SORBI C5XW45_SORBI C5XX52_SORBI C5XX52_SORBI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C5XWJ8_SORBIElongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (466 aa)
A0A194YMM6Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)
A0A1B6P664Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)
A0A1B6PF49Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)
A0A1B6PLD2Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (418 aa)
A0A1B6QHW4Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (985 aa)
A0A1B6QQR5Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (444 aa)
rps1930S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa)
rpl23-A50S ribosomal protein L23-A, chloroplastic; Binds to 23S rRNA. (96 aa)
rpl1450S ribosomal protein L14, chloroplastic; Binds to 23S rRNA. (123 aa)
rpl23-B50S ribosomal protein L23-B, chloroplastic; Binds to 23S rRNA. (93 aa)
C5WSV4_SORBIElongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (453 aa)
C5XPV2_SORBIAlpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (838 aa)
C5XW45_SORBIGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (413 aa)
C5XX52_SORBIGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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