Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Nad4 | Nad7 | A0A1W0VXS1 | A0A1Z5S7A9 | Uncharacterized protein. | Complex1_49kDa domain-containing protein. | 0.991 |
| Nad4 | atpF | A0A1W0VXS1 | A1E9S0 | Uncharacterized protein. | ATP synthase subunit b, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.714 |
| Nad4 | ndhB1 | A0A1W0VXS1 | P0CD50 | Uncharacterized protein. | NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. | 0.949 |
| Nad4 | ndhD | A0A1W0VXS1 | A1E9X4 | Uncharacterized protein. | NAD(P)H-quinone oxidoreductase chain 4, chloroplastic. | 0.426 |
| Nad4 | ndhF | A0A1W0VXS1 | Q33066 | Uncharacterized protein. | NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity). | 0.903 |
| Nad4 | rpl16 | A0A1W0VXS1 | A1E9W2 | Uncharacterized protein. | 50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family. | 0.795 |
| Nad4 | rpl2-A | A0A1W0VXS1 | A1E9W6 | Uncharacterized protein. | 50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family. | 0.736 |
| Nad4 | rpoB | A0A1W0VXS1 | A1E9R4 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.453 |
| Nad7 | Nad4 | A0A1Z5S7A9 | A0A1W0VXS1 | Complex1_49kDa domain-containing protein. | Uncharacterized protein. | 0.991 |
| Nad7 | atpF | A0A1Z5S7A9 | A1E9S0 | Complex1_49kDa domain-containing protein. | ATP synthase subunit b, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.795 |
| Nad7 | ndhB1 | A0A1Z5S7A9 | P0CD50 | Complex1_49kDa domain-containing protein. | NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. | 0.980 |
| Nad7 | ndhD | A0A1Z5S7A9 | A1E9X4 | Complex1_49kDa domain-containing protein. | NAD(P)H-quinone oxidoreductase chain 4, chloroplastic. | 0.986 |
| Nad7 | ndhF | A0A1Z5S7A9 | Q33066 | Complex1_49kDa domain-containing protein. | NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity). | 0.987 |
| Nad7 | rpl16 | A0A1Z5S7A9 | A1E9W2 | Complex1_49kDa domain-containing protein. | 50S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family. | 0.835 |
| Nad7 | rpl2-A | A0A1Z5S7A9 | A1E9W6 | Complex1_49kDa domain-containing protein. | 50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family. | 0.817 |
| Nad7 | rpoB | A0A1Z5S7A9 | A1E9R4 | Complex1_49kDa domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.521 |
| atpF | Nad4 | A1E9S0 | A0A1W0VXS1 | ATP synthase subunit b, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Uncharacterized protein. | 0.714 |
| atpF | Nad7 | A1E9S0 | A0A1Z5S7A9 | ATP synthase subunit b, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Complex1_49kDa domain-containing protein. | 0.795 |
| atpF | ndhB1 | A1E9S0 | P0CD50 | ATP synthase subunit b, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. | 0.834 |
| atpF | ndhD | A1E9S0 | A1E9X4 | ATP synthase subunit b, chloroplastic; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | NAD(P)H-quinone oxidoreductase chain 4, chloroplastic. | 0.810 |
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