16 items (Sorghum bicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5YH12_SORBI	Caffeic acid O-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (362 aa)
	C5YQ69_SORBI	Uncharacterized protein. (328 aa)
	A0A1B6P870	Uncharacterized protein; Belongs to the BI1 family. (264 aa)
	A0A1B6PS42	TCTP domain-containing protein; Belongs to the TCTP family. (135 aa)
	A0A1B6Q5L6	Uncharacterized protein; Belongs to the plant dehydrin family. (208 aa)
	A0A1Z5RK96	TCTP domain-containing protein; Belongs to the TCTP family. (167 aa)
	A0A1Z5RKP1	Uncharacterized protein. (476 aa)
	C5WTD9_SORBI	Uncharacterized protein; Belongs to the expansin family. (266 aa)
	C5WX79_SORBI	Uncharacterized protein; Belongs to the BI1 family. (243 aa)
	C5WX80_SORBI	Uncharacterized protein; Belongs to the BI1 family. (247 aa)
	C5X172_SORBI	Uncharacterized protein; Belongs to the BI1 family. (250 aa)
	C5XB01_SORBI	Uncharacterized protein; Belongs to the BI1 family. (248 aa)
	C5XDW7_SORBI	Uncharacterized protein. (253 aa)
	C5Y0Y5_SORBI	Uncharacterized protein. (238 aa)
	C5Y335_SORBI	Uncharacterized protein. (332 aa)
	C5Y5A4_SORBI	Uncharacterized protein; Belongs to the BI1 family. (271 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6P870	A0A1B6PS42	A0A1B6P870	A0A1B6PS42	Uncharacterized protein; Belongs to the BI1 family.	TCTP domain-containing protein; Belongs to the TCTP family.	0.666
A0A1B6P870	A0A1B6Q5L6	A0A1B6P870	A0A1B6Q5L6	Uncharacterized protein; Belongs to the BI1 family.	Uncharacterized protein; Belongs to the plant dehydrin family.	0.617
A0A1B6P870	A0A1Z5RK96	A0A1B6P870	A0A1Z5RK96	Uncharacterized protein; Belongs to the BI1 family.	TCTP domain-containing protein; Belongs to the TCTP family.	0.666
A0A1B6P870	A0A1Z5RKP1	A0A1B6P870	A0A1Z5RKP1	Uncharacterized protein; Belongs to the BI1 family.	Uncharacterized protein.	0.617
A0A1B6P870	C5WTD9_SORBI	A0A1B6P870	C5WTD9	Uncharacterized protein; Belongs to the BI1 family.	Uncharacterized protein; Belongs to the expansin family.	0.617
A0A1B6P870	C5XDW7_SORBI	A0A1B6P870	C5XDW7	Uncharacterized protein; Belongs to the BI1 family.	Uncharacterized protein.	0.617
A0A1B6P870	C5Y0Y5_SORBI	A0A1B6P870	C5Y0Y5	Uncharacterized protein; Belongs to the BI1 family.	Uncharacterized protein.	0.623
A0A1B6P870	C5Y335_SORBI	A0A1B6P870	C5Y335	Uncharacterized protein; Belongs to the BI1 family.	Uncharacterized protein.	0.689
A0A1B6P870	C5YH12_SORBI	A0A1B6P870	C5YH12	Uncharacterized protein; Belongs to the BI1 family.	Caffeic acid O-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.	0.424
A0A1B6P870	C5YQ69_SORBI	A0A1B6P870	C5YQ69	Uncharacterized protein; Belongs to the BI1 family.	Uncharacterized protein.	0.689
A0A1B6PS42	A0A1B6P870	A0A1B6PS42	A0A1B6P870	TCTP domain-containing protein; Belongs to the TCTP family.	Uncharacterized protein; Belongs to the BI1 family.	0.666
A0A1B6PS42	A0A1B6Q5L6	A0A1B6PS42	A0A1B6Q5L6	TCTP domain-containing protein; Belongs to the TCTP family.	Uncharacterized protein; Belongs to the plant dehydrin family.	0.495
A0A1B6PS42	A0A1Z5RKP1	A0A1B6PS42	A0A1Z5RKP1	TCTP domain-containing protein; Belongs to the TCTP family.	Uncharacterized protein.	0.499
A0A1B6PS42	C5WTD9_SORBI	A0A1B6PS42	C5WTD9	TCTP domain-containing protein; Belongs to the TCTP family.	Uncharacterized protein; Belongs to the expansin family.	0.435
A0A1B6PS42	C5WX79_SORBI	A0A1B6PS42	C5WX79	TCTP domain-containing protein; Belongs to the TCTP family.	Uncharacterized protein; Belongs to the BI1 family.	0.666
A0A1B6PS42	C5WX80_SORBI	A0A1B6PS42	C5WX80	TCTP domain-containing protein; Belongs to the TCTP family.	Uncharacterized protein; Belongs to the BI1 family.	0.666
A0A1B6PS42	C5X172_SORBI	A0A1B6PS42	C5X172	TCTP domain-containing protein; Belongs to the TCTP family.	Uncharacterized protein; Belongs to the BI1 family.	0.666
A0A1B6PS42	C5XB01_SORBI	A0A1B6PS42	C5XB01	TCTP domain-containing protein; Belongs to the TCTP family.	Uncharacterized protein; Belongs to the BI1 family.	0.666
A0A1B6PS42	C5XDW7_SORBI	A0A1B6PS42	C5XDW7	TCTP domain-containing protein; Belongs to the TCTP family.	Uncharacterized protein.	0.430
A0A1B6PS42	C5Y0Y5_SORBI	A0A1B6PS42	C5Y0Y5	TCTP domain-containing protein; Belongs to the TCTP family.	Uncharacterized protein.	0.495

page 1 of 10

Server load: low (18%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About