STRINGSTRING
A0A1B6PQI9 A0A1B6PQI9 A0A1W0W3Z5 A0A1W0W3Z5 A0A1Z5REV8 A0A1Z5REV8 C5XS38_SORBI C5XS38_SORBI C5Y359_SORBI C5Y359_SORBI C5Y360_SORBI C5Y360_SORBI C5YQ75_SORBI C5YQ75_SORBI C5YST8_SORBI C5YST8_SORBI Sb0246s002010 Sb0246s002010 C4H C4H
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1B6PQI9Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (478 aa)
A0A1W0W3Z5Epimerase domain-containing protein. (346 aa)
A0A1Z5REV8Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (496 aa)
C5XS38_SORBIAldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (486 aa)
C5Y359_SORBIPeroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (340 aa)
C5Y360_SORBIPeroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (328 aa)
C5YQ75_SORBIPeroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (328 aa)
C5YST8_SORBIAldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (487 aa)
Sb0246s002010Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (320 aa)
C4HCinnamic acid 4-hydroxylase; Belongs to the cytochrome P450 family. (501 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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