(30 nodes) (2022) Tartary buckwheat FtF3H1 as a metabolic branch switch to increase anthocyanin content in transgenic plant. network (Sorghum bicolor)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	C5WW94_SORBI	Uncharacterized protein. (377 aa)
	C5XXT8_SORBI	Phenylalanine ammonia-lyase. (704 aa)
	C5XXT9_SORBI	Phenylalanine ammonia-lyase. (718 aa)
	C5XXU0_SORBI	Phenylalanine ammonia-lyase. (714 aa)
	C5XXU3_SORBI	Phenylalanine ammonia-lyase. (714 aa)
	C5Y0F9_SORBI	Uncharacterized protein. (566 aa)
	CYP71AM1	Cytochrome P450 monooxygenase; Belongs to the cytochrome P450 family. (528 aa)
	C5YCD6_SORBI	Phenylalanine ammonia-lyase. (703 aa)
	C5YGM0_SORBI	Epimerase domain-containing protein. (340 aa)
	C5YGM2_SORBI	Epimerase domain-containing protein. (341 aa)
	C5YJI8_SORBI	Uncharacterized protein. (571 aa)
	C5YLR0_SORBI	Uncharacterized protein. (552 aa)
	CYP71AF1	Cytochrome P450 monooxygenase; Belongs to the cytochrome P450 family. (513 aa)
	C5Z783_SORBI	Uncharacterized protein. (557 aa)
	C4H	Cinnamic acid 4-hydroxylase; Belongs to the cytochrome P450 family. (501 aa)
	A0A1B6PND3	Epimerase domain-containing protein. (345 aa)
	A0A1B6PND6	Epimerase domain-containing protein. (343 aa)
	A0A1B6PND9	Epimerase domain-containing protein. (346 aa)
	A0A1B6QLK8	Uncharacterized protein. (573 aa)
	A0A1B6QQG1	Uncharacterized protein. (553 aa)
	A0A1Z5RDZ8	Phenylalanine ammonia-lyase. (714 aa)
	A0A1Z5RF54	Epimerase domain-containing protein. (388 aa)
	A0A1Z5S6P3	Uncharacterized protein. (557 aa)
	Cyp	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (172 aa)
	C5WS41_SORBI	Phenylalanine ammonia-lyase. (709 aa)
	C5XFF3_SORBI	Uncharacterized protein. (555 aa)
	C5XJK6_SORBI	Uncharacterized protein. (605 aa)
	C5XRG4_SORBI	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (399 aa)
	C5XSV9_SORBI	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (332 aa)
	C5XW95_SORBI	Uncharacterized protein. (555 aa)

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6PND3	A0A1B6QLK8	A0A1B6PND3	A0A1B6QLK8	Epimerase domain-containing protein.	Uncharacterized protein.	0.475
A0A1B6PND3	A0A1B6QQG1	A0A1B6PND3	A0A1B6QQG1	Epimerase domain-containing protein.	Uncharacterized protein.	0.481
A0A1B6PND3	A0A1Z5RDZ8	A0A1B6PND3	A0A1Z5RDZ8	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.457
A0A1B6PND3	A0A1Z5S6P3	A0A1B6PND3	A0A1Z5S6P3	Epimerase domain-containing protein.	Uncharacterized protein.	0.488
A0A1B6PND3	C4H	A0A1B6PND3	Q94IP1	Epimerase domain-containing protein.	Cinnamic acid 4-hydroxylase; Belongs to the cytochrome P450 family.	0.468
A0A1B6PND3	C5WS41_SORBI	A0A1B6PND3	C5WS41	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.434
A0A1B6PND3	C5XFF3_SORBI	A0A1B6PND3	C5XFF3	Epimerase domain-containing protein.	Uncharacterized protein.	0.488
A0A1B6PND3	C5XJK6_SORBI	A0A1B6PND3	C5XJK6	Epimerase domain-containing protein.	Uncharacterized protein.	0.481
A0A1B6PND3	C5XRG4_SORBI	A0A1B6PND3	C5XRG4	Epimerase domain-containing protein.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.966
A0A1B6PND3	C5XSV9_SORBI	A0A1B6PND3	C5XSV9	Epimerase domain-containing protein.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.480
A0A1B6PND3	C5XW95_SORBI	A0A1B6PND3	C5XW95	Epimerase domain-containing protein.	Uncharacterized protein.	0.488
A0A1B6PND3	C5XXT8_SORBI	A0A1B6PND3	C5XXT8	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.433
A0A1B6PND3	C5XXT9_SORBI	A0A1B6PND3	C5XXT9	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.432
A0A1B6PND3	C5XXU0_SORBI	A0A1B6PND3	C5XXU0	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.432
A0A1B6PND3	C5XXU3_SORBI	A0A1B6PND3	C5XXU3	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.432
A0A1B6PND3	C5Y0F9_SORBI	A0A1B6PND3	C5Y0F9	Epimerase domain-containing protein.	Uncharacterized protein.	0.488
A0A1B6PND3	C5YCD6_SORBI	A0A1B6PND3	C5YCD6	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.433
A0A1B6PND3	C5YJI8_SORBI	A0A1B6PND3	C5YJI8	Epimerase domain-containing protein.	Uncharacterized protein.	0.488
A0A1B6PND3	C5YLR0_SORBI	A0A1B6PND3	C5YLR0	Epimerase domain-containing protein.	Uncharacterized protein.	0.488
A0A1B6PND3	C5Z783_SORBI	A0A1B6PND3	C5Z783	Epimerase domain-containing protein.	Uncharacterized protein.	0.475

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