STRINGSTRING
A0A1B6QCB0 A0A1B6QCB0 A0A1B6PI12 A0A1B6PI12 A0A1B6Q5R0 A0A1B6Q5R0 A0A1B6QC58 A0A1B6QC58 C5X2B1_SORBI C5X2B1_SORBI C5XSU8_SORBI C5XSU8_SORBI C5XSV0_SORBI C5XSV0_SORBI C5YFF5_SORBI C5YFF5_SORBI C5YMA9_SORBI C5YMA9_SORBI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1B6QCB0Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (412 aa)
A0A1B6PI12Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (438 aa)
A0A1B6Q5R0Uncharacterized protein. (882 aa)
A0A1B6QC58Alpha-amylase. (850 aa)
C5X2B1_SORBIAlpha-amylase; Belongs to the glycosyl hydrolase 13 family. (437 aa)
C5XSU8_SORBIAlpha-amylase; Belongs to the glycosyl hydrolase 13 family. (428 aa)
C5XSV0_SORBIAlpha-amylase; Belongs to the glycosyl hydrolase 13 family. (428 aa)
C5YFF5_SORBIAlpha-amylase; Belongs to the glycosyl hydrolase 13 family. (415 aa)
C5YMA9_SORBIAlpha-amylase; Belongs to the glycosyl hydrolase 13 family. (443 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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