STRINGSTRING
A0A194YL86 A0A194YL86 A0A194YR32 A0A194YR32 A0A1B6P8E2 A0A1B6P8E2 MCM7 MCM7 A0A1B6PLL3 A0A1B6PLL3 A0A1B6PMW5 A0A1B6PMW5 A0A1B6PSU4 A0A1B6PSU4 A0A1B6Q2M7 A0A1B6Q2M7 A0A1B6Q5I4 A0A1B6Q5I4 A0A1B6QHJ2 A0A1B6QHJ2 A0A1B6QK46 A0A1B6QK46 A0A1W0VSD3 A0A1W0VSD3 A0A1W0W0M8 A0A1W0W0M8 A0A1W0W3S7 A0A1W0W3S7 A0A1W0W5Y8 A0A1W0W5Y8 A0A1Z5R420 A0A1Z5R420 A0A1Z5R875 A0A1Z5R875 A0A1Z5RLY5 A0A1Z5RLY5 A0A1Z5RNG0 A0A1Z5RNG0 A0A1Z5S8C0 A0A1Z5S8C0 B3VTC8_SORBI B3VTC8_SORBI C5WST0_SORBI C5WST0_SORBI C5WVW1_SORBI C5WVW1_SORBI C5WZZ1_SORBI C5WZZ1_SORBI C5X1A1_SORBI C5X1A1_SORBI C5X5Y5_SORBI C5X5Y5_SORBI C5X609_SORBI C5X609_SORBI C5X6I1_SORBI C5X6I1_SORBI C5XF43_SORBI C5XF43_SORBI C5XJI8_SORBI C5XJI8_SORBI C5XL75_SORBI C5XL75_SORBI C5XMX5_SORBI C5XMX5_SORBI C5XTJ5_SORBI C5XTJ5_SORBI C5XUH8_SORBI C5XUH8_SORBI C5XV51_SORBI C5XV51_SORBI C5XVE8_SORBI C5XVE8_SORBI C5XW32_SORBI C5XW32_SORBI C5XWP7_SORBI C5XWP7_SORBI C5Y6L0_SORBI C5Y6L0_SORBI C5YE32_SORBI C5YE32_SORBI C5YES0_SORBI C5YES0_SORBI C5YGS0_SORBI C5YGS0_SORBI C5YHG1_SORBI C5YHG1_SORBI C5YM64_SORBI C5YM64_SORBI C5YP25_SORBI C5YP25_SORBI C5YS45_SORBI C5YS45_SORBI C5YST1_SORBI C5YST1_SORBI FEN1-A FEN1-A C5YV76_SORBI C5YV76_SORBI C5Z8P5_SORBI C5Z8P5_SORBI Sb0019s004400 Sb0019s004400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A194YL86RPA_C domain-containing protein. (346 aa)
A0A194YR32RPA_C domain-containing protein. (282 aa)
A0A1B6P8E2DNA primase; Belongs to the eukaryotic-type primase small subunit family. (455 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (720 aa)
A0A1B6PLL3Uncharacterized protein. (302 aa)
A0A1B6PMW5Uncharacterized protein. (1278 aa)
A0A1B6PSU4Replication factor C subunit 1. (988 aa)
A0A1B6Q2M7Uncharacterized protein. (106 aa)
A0A1B6Q5I4DNA ligase. (1401 aa)
A0A1B6QHJ2AAA domain-containing protein. (354 aa)
A0A1B6QK46DNA ligase. (931 aa)
A0A1W0VSD3DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (630 aa)
A0A1W0W0M8DNA polymerase. (1313 aa)
A0A1W0W3S7Uncharacterized protein. (197 aa)
A0A1W0W5Y8Replication factor C subunit 1. (990 aa)
A0A1Z5R420DNA helicase; Belongs to the MCM family. (1378 aa)
A0A1Z5R875POLAc domain-containing protein. (977 aa)
A0A1Z5RLY5Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (280 aa)
A0A1Z5RNG0DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2097 aa)
A0A1Z5S8C0Uncharacterized protein. (609 aa)
B3VTC8_SORBIReplication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (933 aa)
C5WST0_SORBIReplication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (623 aa)
C5WVW1_SORBIAAA domain-containing protein. (339 aa)
C5WZZ1_SORBIUncharacterized protein. (435 aa)
C5X1A1_SORBIUncharacterized protein. (137 aa)
C5X5Y5_SORBICBFD_NFYB_HMF domain-containing protein. (174 aa)
C5X609_SORBIUncharacterized protein. (131 aa)
C5X6I1_SORBIProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (288 aa)
C5XF43_SORBIUncharacterized protein. (221 aa)
C5XJI8_SORBIUncharacterized protein. (146 aa)
C5XL75_SORBIUncharacterized protein. (516 aa)
C5XMX5_SORBIDNA helicase; Belongs to the MCM family. (852 aa)
C5XTJ5_SORBIAAA domain-containing protein. (362 aa)
C5XUH8_SORBIDNA helicase; Belongs to the MCM family. (729 aa)
C5XV51_SORBIProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
C5XVE8_SORBIDNA polymerase. (1101 aa)
C5XW32_SORBIUncharacterized protein. (160 aa)
C5XWP7_SORBIRPA_C domain-containing protein. (278 aa)
C5Y6L0_SORBIDNA polymerase. (1099 aa)
C5YE32_SORBIAAA domain-containing protein. (333 aa)
C5YES0_SORBIDNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (465 aa)
C5YGS0_SORBIPOLAc domain-containing protein. (1024 aa)
C5YHG1_SORBIUncharacterized protein. (133 aa)
C5YM64_SORBIDNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (533 aa)
C5YP25_SORBIRPA_C domain-containing protein. (242 aa)
C5YS45_SORBIRibonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (297 aa)
C5YST1_SORBIAAA domain-containing protein. (339 aa)
FEN1-AFlap endonuclease 1-A; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts a [...] (380 aa)
C5YV76_SORBIDNA helicase; Belongs to the MCM family. (831 aa)
C5Z8P5_SORBIRibonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (297 aa)
Sb0019s004400DNA helicase; Belongs to the MCM family. (955 aa)
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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