STRINGSTRING
B9G98_00693 B9G98_00693 B9G98_04679 B9G98_04679 B9G98_04530 B9G98_04530 B9G98_04462 B9G98_04462 B9G98_04211 B9G98_04211 B9G98_04018 B9G98_04018 B9G98_02972 B9G98_02972 B9G98_02916 B9G98_02916 B9G98_02652 B9G98_02652 B9G98_02249 B9G98_02249 B9G98_02188 B9G98_02188 B9G98_02030 B9G98_02030 B9G98_01869 B9G98_01869 B9G98_01431 B9G98_01431 B9G98_01392 B9G98_01392 B9G98_01337 B9G98_01337 B9G98_01229 B9G98_01229 B9G98_01128 B9G98_01128 B9G98_00997 B9G98_00997 B9G98_00916 B9G98_00916 B9G98_00928 B9G98_00928 B9G98_00699 B9G98_00699 B9G98_00174 B9G98_00174 B9G98_00102 B9G98_00102
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B9G98_00693Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4577 aa)
B9G98_04679Large subunit GTPase 1. (595 aa)
B9G98_04530Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (232 aa)
B9G98_04462Ribosome biogenesis protein MAK21. (913 aa)
B9G98_04211Ribosome assembly protein SQT1. (417 aa)
B9G98_04018RNA exonuclease 4. (266 aa)
B9G98_02972C3H1-type domain-containing protein. (174 aa)
B9G98_02916rRNA biogenesis protein rrp5. (1586 aa)
B9G98_02652Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (381 aa)
B9G98_02249ATP-dependent RNA helicase MRH4, mitochondrial. (491 aa)
B9G98_0218860S ribosomal protein L10. (219 aa)
B9G98_02030Histidine protein methyltransferase 1. (292 aa)
B9G98_01869Ribosome biogenesis protein SSF2. (398 aa)
B9G98_0143160S ribosomal protein L25-B; Belongs to the universal ribosomal protein uL23 family. (144 aa)
B9G98_01392Ribosome biogenesis protein RPF2. (316 aa)
B9G98_0133760S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...] (311 aa)
B9G98_01229Ribosome biogenesis protein BRX1. (281 aa)
B9G98_0112860S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (387 aa)
B9G98_0099760S ribosomal protein L6-B. (179 aa)
B9G98_00916Ribosome assembly protein 4. (509 aa)
B9G98_0092860S ribosomal protein L5. (295 aa)
B9G98_00699Protein MAK11. (360 aa)
B9G98_00174DNA polymerase V. (945 aa)
B9G98_00102Ribosome assembly protein 3. (136 aa)
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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