STRINGSTRING
B9G98_01683 B9G98_01683 B9G98_01431 B9G98_01431 B9G98_01392 B9G98_01392 B9G98_01337 B9G98_01337 B9G98_01229 B9G98_01229 B9G98_01145 B9G98_01145 B9G98_01059 B9G98_01059 B9G98_00970 B9G98_00970 B9G98_00934 B9G98_00934 B9G98_00928 B9G98_00928 B9G98_00906 B9G98_00906 B9G98_00784 B9G98_00784 B9G98_00671 B9G98_00671 B9G98_00518 B9G98_00518 B9G98_00378 B9G98_00378 B9G98_00330 B9G98_00330 B9G98_00174 B9G98_00174 B9G98_00112 B9G98_00112 B9G98_00039 B9G98_00039 B9G98_00029 B9G98_00029 B9G98_04688 B9G98_04688 B9G98_04530 B9G98_04530 B9G98_04454 B9G98_04454 B9G98_04203 B9G98_04203 B9G98_04162 B9G98_04162 B9G98_04006 B9G98_04006 B9G98_03959 B9G98_03959 B9G98_03755 B9G98_03755 B9G98_03447 B9G98_03447 B9G98_03355 B9G98_03355 B9G98_03142 B9G98_03142 B9G98_03019 B9G98_03019 B9G98_03016 B9G98_03016 B9G98_02897 B9G98_02897 B9G98_02916 B9G98_02916 B9G98_02652 B9G98_02652 B9G98_02569 B9G98_02569 B9G98_02422 B9G98_02422 B9G98_02338 B9G98_02338 B9G98_02322 B9G98_02322 B9G98_02065 B9G98_02065 B9G98_01993 B9G98_01993 B9G98_01869 B9G98_01869 B9G98_01887 B9G98_01887 B9G98_01769 B9G98_01769 B9G98_01750 B9G98_01750 B9G98_01679 B9G98_01679 B9G98_01698 B9G98_01698 B9G98_01693 B9G98_01693 B9G98_01537 B9G98_01537
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B9G98_01683U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
B9G98_0143160S ribosomal protein L25-B; Belongs to the universal ribosomal protein uL23 family. (144 aa)
B9G98_01392Ribosome biogenesis protein RPF2. (316 aa)
B9G98_0133760S acidic ribosomal protein P0; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome t [...] (311 aa)
B9G98_01229Ribosome biogenesis protein BRX1. (281 aa)
B9G98_0114560S ribosomal protein L2. (254 aa)
B9G98_01059RRM domain-containing protein. (229 aa)
B9G98_00970Exosome complex exonuclease RRP6. (669 aa)
B9G98_00934Ribosome biogenesis protein C8F11.04. (327 aa)
B9G98_0092860S ribosomal protein L5. (295 aa)
B9G98_00906Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (477 aa)
B9G98_0078454S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family. (145 aa)
B9G98_00671Nucleolar protein 4. (649 aa)
B9G98_0051837S ribosomal protein S18, mitochondrial. (185 aa)
B9G98_00378Ribosomal RNA-processing protein 7. (234 aa)
B9G98_0033037S ribosomal protein MRP17, mitochondrial. (152 aa)
B9G98_00174DNA polymerase V. (945 aa)
B9G98_00112U3 small nucleolar ribonucleoprotein IMP4. (283 aa)
B9G98_0003960S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
B9G98_0002940S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
B9G98_04688rRNA-processing protein UTP23. (242 aa)
B9G98_04530Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (232 aa)
B9G98_0445440S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (259 aa)
B9G98_04203Mitochondrial group I intron splicing factor CCM1. (685 aa)
B9G98_0416237S ribosomal protein S7, mitochondrial. (267 aa)
B9G98_0400654S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. (224 aa)
B9G98_0395940S ribosomal protein S11-B; Belongs to the universal ribosomal protein uS17 family. (155 aa)
B9G98_0375554S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family. (132 aa)
B9G98_0344720S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (405 aa)
B9G98_0335540S ribosomal protein S9-A. (191 aa)
B9G98_0314260S ribosomal protein L9-B. (189 aa)
B9G98_0301940S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (257 aa)
B9G98_0301660S ribosomal protein L37-B. (89 aa)
B9G98_0289760S ribosomal protein L9-A. (189 aa)
B9G98_02916rRNA biogenesis protein rrp5. (1586 aa)
B9G98_02652Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (381 aa)
B9G98_02569Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (986 aa)
B9G98_0242260S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (485 aa)
B9G98_02338Ribosome production factor 1. (293 aa)
B9G98_0232237S ribosomal protein RSM18, mitochondrial. (170 aa)
B9G98_0206537S ribosomal protein NAM9, mitochondrial. (468 aa)
B9G98_01993Ribonuclease MRP protein subunit rmp1. (156 aa)
B9G98_01869Ribosome biogenesis protein SSF2. (398 aa)
B9G98_01887Ribosomal RNA small subunit methyltransferase NEP1. (239 aa)
B9G98_0176960S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (172 aa)
B9G98_0175040S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (208 aa)
B9G98_0167954S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family. (222 aa)
B9G98_0169860S ribosomal protein L23-B; Belongs to the universal ribosomal protein uL14 family. (137 aa)
B9G98_0169340S ribosomal protein S18-B; Belongs to the universal ribosomal protein uS13 family. (155 aa)
B9G98_01537Eukaryotic translation initiation factor 5B. (1008 aa)
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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