STRINGSTRING
B9G98_02114 B9G98_02114 B9G98_01495 B9G98_01495 B9G98_01470 B9G98_01470 B9G98_01145 B9G98_01145 B9G98_01122 B9G98_01122 B9G98_00997 B9G98_00997 B9G98_00637 B9G98_00637 B9G98_04454 B9G98_04454 B9G98_02569 B9G98_02569
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B9G98_021145'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1440 aa)
B9G98_0149554S ribosomal protein RML2, mitochondrial. (401 aa)
B9G98_0147060S ribosomal protein L14-A. (137 aa)
B9G98_0114560S ribosomal protein L2. (254 aa)
B9G98_0112260S ribosomal protein L26-A. (127 aa)
B9G98_0099760S ribosomal protein L6-B. (179 aa)
B9G98_00637Eukaryotic translation initiation factor 5A. (158 aa)
B9G98_0445440S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (259 aa)
B9G98_02569Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (986 aa)
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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