STRINGSTRING
B9G98_04279 B9G98_04279 B9G98_00029 B9G98_00029 B9G98_00112 B9G98_00112 B9G98_00152 B9G98_00152 B9G98_00181 B9G98_00181 B9G98_00185 B9G98_00185 B9G98_00235 B9G98_00235 RPS0 RPS0 B9G98_00276 B9G98_00276 B9G98_00336 B9G98_00336 B9G98_00373 B9G98_00373 B9G98_00335 B9G98_00335 B9G98_00378 B9G98_00378 B9G98_00367 B9G98_00367 B9G98_00360 B9G98_00360 B9G98_00458 B9G98_00458 TSR3 TSR3 B9G98_00547 B9G98_00547 B9G98_00647 B9G98_00647 B9G98_00696 B9G98_00696 B9G98_00671 B9G98_00671 B9G98_00675 B9G98_00675 B9G98_00731 B9G98_00731 SPB1 SPB1 B9G98_00779 B9G98_00779 B9G98_00850 B9G98_00850 B9G98_00970 B9G98_00970 B9G98_01023 B9G98_01023 B9G98_01044 B9G98_01044 B9G98_01206 B9G98_01206 B9G98_01246 B9G98_01246 B9G98_01266 B9G98_01266 B9G98_01293 B9G98_01293 B9G98_01403 B9G98_01403 B9G98_01387 B9G98_01387 B9G98_01430 B9G98_01430 B9G98_01452 B9G98_01452 B9G98_01454 B9G98_01454 B9G98_01457 B9G98_01457 B9G98_01546 B9G98_01546 B9G98_01588 B9G98_01588 B9G98_01594 B9G98_01594 B9G98_01604 B9G98_01604 B9G98_01636 B9G98_01636 B9G98_01661 B9G98_01661 B9G98_01683 B9G98_01683 B9G98_01693 B9G98_01693 B9G98_01703 B9G98_01703 B9G98_01667 B9G98_01667 B9G98_01763 B9G98_01763 B9G98_01750 B9G98_01750 B9G98_01760 B9G98_01760 B9G98_00967 B9G98_00967 B9G98_01850 B9G98_01850 B9G98_01876 B9G98_01876 B9G98_01870 B9G98_01870 B9G98_01887 B9G98_01887 B9G98_01907 B9G98_01907 NAT10 NAT10 NOP7 NOP7 B9G98_02003 B9G98_02003 B9G98_02020 B9G98_02020 B9G98_02065 B9G98_02065 B9G98_02179 B9G98_02179 B9G98_02251 B9G98_02251 B9G98_02311 B9G98_02311 B9G98_02267 B9G98_02267 B9G98_02324 B9G98_02324 B9G98_02309 B9G98_02309 B9G98_02373 B9G98_02373 B9G98_02346 B9G98_02346 YTM1 YTM1 B9G98_02503 B9G98_02503 B9G98_02513 B9G98_02513 B9G98_02572 B9G98_02572 B9G98_02546 B9G98_02546 B9G98_02559 B9G98_02559 B9G98_02615 B9G98_02615 B9G98_02685 B9G98_02685 ERB1 ERB1 B9G98_02740 B9G98_02740 B9G98_02746 B9G98_02746 B9G98_02773 B9G98_02773 B9G98_02775 B9G98_02775 B9G98_02801 B9G98_02801 B9G98_02813 B9G98_02813 B9G98_02850 B9G98_02850 B9G98_02900 B9G98_02900 B9G98_02916 B9G98_02916 B9G98_02921 B9G98_02921 B9G98_03019 B9G98_03019 B9G98_03044 B9G98_03044 B9G98_03074 B9G98_03074 B9G98_03132 B9G98_03132 B9G98_03139 B9G98_03139 B9G98_03164 B9G98_03164 B9G98_03230 B9G98_03230 B9G98_03237 B9G98_03237 B9G98_03280 B9G98_03280 B9G98_03327 B9G98_03327 B9G98_03355 B9G98_03355 B9G98_03447 B9G98_03447 B9G98_03572 B9G98_03572 RPS1 RPS1 B9G98_03770 B9G98_03770 B9G98_03779 B9G98_03779 B9G98_03832 B9G98_03832 B9G98_03835 B9G98_03835 B9G98_03959 B9G98_03959 B9G98_04018 B9G98_04018 B9G98_04053 B9G98_04053 B9G98_04108 B9G98_04108 B9G98_04104 B9G98_04104 B9G98_04097 B9G98_04097 B9G98_04129 B9G98_04129 B9G98_04200 B9G98_04200 B9G98_04360 B9G98_04360 B9G98_04358 B9G98_04358 B9G98_04397 B9G98_04397 B9G98_04399 B9G98_04399 B9G98_04454 B9G98_04454 B9G98_04528 B9G98_04528 B9G98_04591 B9G98_04591 B9G98_04630 B9G98_04630 B9G98_04735 B9G98_04735
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B9G98_04279Nucleolar protein 58. (505 aa)
B9G98_0002940S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
B9G98_00112U3 small nucleolar ribonucleoprotein IMP4. (283 aa)
B9G98_00152KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (307 aa)
B9G98_00181rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (311 aa)
B9G98_00185U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (233 aa)
B9G98_00235Pre-rRNA-processing protein IPI1. (298 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (261 aa)
B9G98_0027640S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (195 aa)
B9G98_00336Ribonuclease Z, mitochondrial. (663 aa)
B9G98_00373U3 small nucleolar RNA-associated protein 10. (1742 aa)
B9G98_00335RNA 3'-terminal phosphate cyclase-like protein. (355 aa)
B9G98_00378Ribosomal RNA-processing protein 7. (234 aa)
B9G98_0036740S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (146 aa)
B9G98_0036040S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (241 aa)
B9G98_00458Tethering factor for nuclear proteasome STS1; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (269 aa)
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (260 aa)
B9G98_0054740S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (149 aa)
B9G98_0064740S ribosomal protein S20. (116 aa)
B9G98_00696rRNA-processing protein EBP2. (313 aa)
B9G98_00671Nucleolar protein 4. (649 aa)
B9G98_00675Nuclear GTP-binding protein NUG1. (484 aa)
B9G98_00731Nucleolar protein 56. (500 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (783 aa)
B9G98_00779Telomere-associated protein 1. (398 aa)
B9G98_00850Putative WD repeat-containing protein C3D6.12. (873 aa)
B9G98_00970Exosome complex exonuclease RRP6. (669 aa)
B9G98_01023Protein SOF1. (446 aa)
B9G98_01044Ribosomal RNA-processing protein 1. (258 aa)
B9G98_01206Polynucleotide 5'-hydroxyl-kinase grc3. (488 aa)
B9G98_01246Periodic tryptophan protein 2. (835 aa)
B9G98_01266Serine/threonine-protein kinase rio1. (449 aa)
B9G98_01293rRNA-processing protein FCF1. (189 aa)
B9G98_0140340S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (155 aa)
B9G98_01387NET1-associated nuclear protein 1. (737 aa)
B9G98_0143037S ribosomal protein SWS2, mitochondrial; Belongs to the universal ribosomal protein uS13 family. (121 aa)
B9G98_0145240S ribosomal protein S10-A. (121 aa)
B9G98_0145440S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (237 aa)
B9G98_014575'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (882 aa)
B9G98_01546Protein LAS1. (359 aa)
B9G98_0158840S ribosomal protein S19-A. (147 aa)
B9G98_0159440S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (142 aa)
B9G98_01604U3 small nucleolar RNA-associated protein 20. (2380 aa)
B9G98_01636Uncharacterized protein. (261 aa)
B9G98_01661Something about silencing protein 10. (509 aa)
B9G98_01683U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
B9G98_0169340S ribosomal protein S18-B; Belongs to the universal ribosomal protein uS13 family. (155 aa)
B9G98_01703U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (615 aa)
B9G98_01667U3 small nucleolar RNA-associated protein 7. (515 aa)
B9G98_01763rRNA methyltransferase 2, mitochondrial. (285 aa)
B9G98_0175040S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (208 aa)
B9G98_01760Ribosome biogenesis protein BMS1. (1094 aa)
B9G98_00967Ribosome biogenesis protein TSR1. (757 aa)
B9G98_01850U3 small nucleolar RNA-associated protein 15. (495 aa)
B9G98_01876U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (583 aa)
B9G98_01870ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (419 aa)
B9G98_01887Ribosomal RNA small subunit methyltransferase NEP1. (239 aa)
B9G98_01907Exosome complex component RRP45. (284 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1010 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (576 aa)
B9G98_02003U3 small nucleolar RNA-associated protein 22. (1098 aa)
B9G98_02020U3 small nucleolar RNA-associated protein 21. (894 aa)
B9G98_0206537S ribosomal protein NAM9, mitochondrial. (468 aa)
B9G98_02179ATP-dependent RNA helicase ROK1; Belongs to the DEAD box helicase family. (526 aa)
B9G98_0225160S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (181 aa)
B9G98_02311U3 small nucleolar RNA-associated protein 6. (393 aa)
B9G98_02267Exosome complex component RRP43. (274 aa)
B9G98_02324Putative nucleolar complex protein 14. (767 aa)
B9G98_0230940S ribosomal protein S17-B. (136 aa)
B9G98_02373Putative ATP-dependent RNA helicase DHR1. (1150 aa)
B9G98_02346Exosome complex component RRP4. (300 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (421 aa)
B9G98_02503RIX1 domain-containing protein. (616 aa)
B9G98_02513rRNA biogenesis protein RRP36. (159 aa)
B9G98_02572Exosome complex component RRP42. (267 aa)
B9G98_02546Ribosomal RNA-processing protein 17. (213 aa)
B9G98_0255940S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (104 aa)
B9G98_02615Casein kinase I hhp1; Belongs to the protein kinase superfamily. (461 aa)
B9G98_02685rRNA methyltransferase 1, mitochondrial. (361 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (761 aa)
B9G98_02740U3 small nucleolar ribonucleoprotein LCP5. (287 aa)
B9G98_02746Putative 60S ribosomal protein L28e. (135 aa)
B9G98_02773Exosome complex component RRP46. (219 aa)
B9G98_02775CBF domain-containing protein. (477 aa)
B9G98_0280140S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (197 aa)
B9G98_02813U3 small nucleolar RNA-associated protein 14. (785 aa)
B9G98_02850Pre-rRNA-processing protein PNO1. (257 aa)
B9G98_02900rRNA 2'-O-methyltransferase fibrillarin. (318 aa)
B9G98_02916rRNA biogenesis protein rrp5. (1586 aa)
B9G98_02921Exosome complex component RRP40. (211 aa)
B9G98_0301940S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (257 aa)
B9G98_03044Exosome complex component Rrp41. (244 aa)
B9G98_03074RNA helicase CrhR. (374 aa)
B9G98_0313240S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (120 aa)
B9G98_0313940S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (149 aa)
B9G98_0316460S ribosomal protein L43. (92 aa)
B9G98_03230U3 small nucleolar RNA-associated protein 5. (651 aa)
B9G98_03237ATP-dependent RNA helicase DBP8; Belongs to the DEAD box helicase family. (425 aa)
B9G98_0328040S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (148 aa)
B9G98_03327Ubiquitin-like-specific protease 1. (421 aa)
B9G98_0335540S ribosomal protein S9-A. (191 aa)
B9G98_0344720S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (405 aa)
B9G98_03572Protein LTV1. (371 aa)
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
B9G98_03770Putative U3 small nucleolar RNA-associated protein 13. (741 aa)
B9G98_03779Essential nuclear protein 1. (429 aa)
B9G98_0383240S ribosomal protein S28. (80 aa)
B9G98_0383560S ribosomal protein L34-B. (125 aa)
B9G98_0395940S ribosomal protein S11-B; Belongs to the universal ribosomal protein uS17 family. (155 aa)
B9G98_04018RNA exonuclease 4. (266 aa)
B9G98_0405340S ribosomal protein S27. (82 aa)
B9G98_04108U3 small nucleolar RNA-associated protein 4. (686 aa)
B9G98_0410440S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (145 aa)
B9G98_04097Ribosomal RNA-processing protein 9. (490 aa)
B9G98_04129Protein SPT10. (424 aa)
B9G98_04200Exosome complex component CSL4. (248 aa)
B9G98_04360Putative ribonuclease P protein subunit 3. (265 aa)
B9G98_04358Exosome complex component SKI6. (243 aa)
B9G98_04397ATP-dependent RNA helicase DOB1. (1034 aa)
B9G98_04399Pre-rRNA-processing protein IPI3. (399 aa)
B9G98_0445440S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (259 aa)
B9G98_04528Serine/threonine-protein kinase RIO2. (372 aa)
B9G98_04591Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
B9G98_0463037S ribosomal protein S8, mitochondrial. (158 aa)
B9G98_04735Putative U3 small nucleolar RNA-associated protein 18. (510 aa)
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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