STRINGSTRING
PRT1 PRT1 B9G98_00029 B9G98_00029 B9G98_00159 B9G98_00159 RPS0 RPS0 B9G98_00276 B9G98_00276 TIF32 TIF32 B9G98_00367 B9G98_00367 B9G98_00360 B9G98_00360 B9G98_00442 B9G98_00442 B9G98_00500 B9G98_00500 B9G98_00547 B9G98_00547 B9G98_00647 B9G98_00647 B9G98_00856 B9G98_00856 B9G98_01116 B9G98_01116 B9G98_01403 B9G98_01403 B9G98_01452 B9G98_01452 B9G98_01454 B9G98_01454 B9G98_01563 B9G98_01563 B9G98_01588 B9G98_01588 B9G98_01594 B9G98_01594 B9G98_01693 B9G98_01693 B9G98_01743 B9G98_01743 B9G98_01750 B9G98_01750 B9G98_02309 B9G98_02309 B9G98_02360 B9G98_02360 B9G98_02559 B9G98_02559 B9G98_02801 B9G98_02801 B9G98_03019 B9G98_03019 B9G98_03105 B9G98_03105 B9G98_03132 B9G98_03132 B9G98_03139 B9G98_03139 NIP1 NIP1 B9G98_03215 B9G98_03215 B9G98_03269 B9G98_03269 B9G98_03280 B9G98_03280 B9G98_03355 B9G98_03355 RPS1 RPS1 B9G98_03751 B9G98_03751 B9G98_03926 B9G98_03926 B9G98_03959 B9G98_03959 B9G98_04053 B9G98_04053 B9G98_04068 B9G98_04068 B9G98_04104 B9G98_04104 B9G98_04454 B9G98_04454
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PRT1Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (731 aa)
B9G98_0002940S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
B9G98_00159Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (612 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (261 aa)
B9G98_0027640S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (195 aa)
TIF32Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (965 aa)
B9G98_0036740S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (146 aa)
B9G98_0036040S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (241 aa)
B9G98_00442Putative RNA-binding protein sce3. (381 aa)
B9G98_00500Eukaryotic translation initiation factor 2 subunit alpha. (313 aa)
B9G98_0054740S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (149 aa)
B9G98_0064740S ribosomal protein S20. (116 aa)
B9G98_00856ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. (396 aa)
B9G98_01116Eukaryotic translation initiation factor 3 subunit I. (327 aa)
B9G98_0140340S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (155 aa)
B9G98_0145240S ribosomal protein S10-A. (121 aa)
B9G98_0145440S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (237 aa)
B9G98_01563Eukaryotic translation initiation factor 3 subunit G. (236 aa)
B9G98_0158840S ribosomal protein S19-A. (147 aa)
B9G98_0159440S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (142 aa)
B9G98_0169340S ribosomal protein S18-B; Belongs to the universal ribosomal protein uS13 family. (155 aa)
B9G98_01743Eukaryotic translation initiation factor 2 subunit gamma. (514 aa)
B9G98_0175040S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (208 aa)
B9G98_0230940S ribosomal protein S17-B. (136 aa)
B9G98_02360Polyadenylate-binding protein, cytoplasmic and nuclear. (616 aa)
B9G98_0255940S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (104 aa)
B9G98_0280140S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (197 aa)
B9G98_0301940S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (257 aa)
B9G98_03105Eukaryotic translation initiation factor 4 gamma. (1037 aa)
B9G98_0313240S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (120 aa)
B9G98_0313940S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (149 aa)
NIP1Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (811 aa)
B9G98_03215Eukaryotic translation initiation factor 4E-2; Belongs to the eukaryotic initiation factor 4E family. (208 aa)
B9G98_03269Eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (150 aa)
B9G98_0328040S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (148 aa)
B9G98_0335540S ribosomal protein S9-A. (191 aa)
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
B9G98_03751Uncharacterized protein in HIS3 3'region. (313 aa)
B9G98_03926Nucleolar protein 13. (302 aa)
B9G98_0395940S ribosomal protein S11-B; Belongs to the universal ribosomal protein uS17 family. (155 aa)
B9G98_0405340S ribosomal protein S27. (82 aa)
B9G98_04068Eukaryotic translation initiation factor 2 subunit beta. (260 aa)
B9G98_0410440S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (145 aa)
B9G98_0445440S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (259 aa)
Your Current Organism:
Wickerhamiella sorbophila
NCBI taxonomy Id: 45607
Other names: AJ 4995, ATCC 60130, CBS 6739, CCRC 22618, CCRC:22618, Candida sorbophila, NRRL Y-7921, Torulopsis sorbophila, W. sorbophila
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