STRINGSTRING
Mvol_0064 Mvol_0064 Mvol_0153 Mvol_0153 purO purO rnp2 rnp2 purP purP Mvol_0605 Mvol_0605 Mvol_0754 Mvol_0754 rnp4 rnp4 rnp1 rnp1 Mvol_1088 Mvol_1088 Mvol_1239 Mvol_1239 Mvol_1253 Mvol_1253 rnp3 rnp3 Mvol_1681 Mvol_1681
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mvol_0064PFAM: phosphoesterase RecJ domain protein; nucleic acid binding OB-fold tRNA/helicase-type; RNA binding S1 domain protein; KEGG: dat:HRM2_01850 RecJ-like exonuclease (DnaJ-type Zn finger protein). (757 aa)
Mvol_0153PFAM: Protein of unknown function DUF54; KEGG: aminopeptidase (predicted); Belongs to the UPF0201 family. (154 aa)
purOIMP cyclohydrolase; Catalyzes the cyclization of 5-formylamidoimidazole-4- carboxamide ribonucleotide to IMP. (209 aa)
rnp2Ribonuclease P-related protein; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (136 aa)
purPIMP biosynthesis enzyme PurP domain protein; Catalyzes the ATP- and formate-dependent formylation of 5- aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'-monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates. (361 aa)
Mvol_0605Conserved hypothetical protein. (205 aa)
Mvol_0754PFAM: protein of unknown function DUF88; KEGG: dar:Daro_3189 hypothetical protein. (253 aa)
rnp4RNAse P, Rpr2/Rpp21 subunit; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (145 aa)
rnp1Ribonuclease P, Rpp29; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 1 family. (120 aa)
Mvol_1088PFAM: protein of unknown function DUF366; KEGG: bba:Bd2230 hypothetical protein. (209 aa)
Mvol_1239PFAM: Protein of unknown function DUF54. (153 aa)
Mvol_1253KEGG: dvl:Dvul_2126 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (289 aa)
rnp3Ribonuclease P; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. (263 aa)
Mvol_1681Radical SAM domain protein; KEGG: afr:AFE_2559 molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (513 aa)
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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