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asnB2 asnB2 fhaC fhaC rpfH rpfH xopJ xopJ xopE2 xopE2 virD4 virD4 xopN xopN virB6-4 virB6-4 virB6-3 virB6-3 virB6-2 virB6-2 virB6 virB6 wzt wzt wzm wzm xopQ xopQ fruA fruA avrBs2 avrBs2 xopE1 xopE1 hpaF hpaF xopF1 xopF1 xopX xopX xopB xopB APO91890.1 APO91890.1 mltB mltB pth pth asnB asnB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
asnB2Asparagine synthase (glutamine-hydrolyzing); Derived by automated computational analysis using gene prediction method: Protein Homology. (646 aa)
fhaCTransporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)
rpfHRpfH protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
xopJHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
xopE2Avirulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
virD4Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)
xopNType III secretion system effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (733 aa)
virB6-4Type IV secretion system protein virB6; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
virB6-3Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
virB6-2Type IV secretion system protein virB6; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
virB6Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
wztABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
wzmGlycosyl transferase family 1; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
xopQHypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
fruAPTS fructose transporter subunit EIIBC; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)
avrBs2Avirulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (729 aa)
xopE1Avirulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
hpaFHypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (93 aa)
xopF1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
xopXType III secretion system effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa)
xopBHypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
APO91890.1Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
mltBLytic murein transglycosylase B; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
pthaminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. (193 aa)
asnBFunctions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; Derived by automated computational analysis using gene prediction method: Protein Homology. (564 aa)
Your Current Organism:
Xanthomonas euvesicatoria
NCBI taxonomy Id: 456327
Other names: ATCC 11633, Bacterium vesicatorium, DSM 19128, ICMP 109, ICMP 98, NCPPB 2968, X. euvesicatoria, Xanthomonas campestris (pv. vesicatoria), Xanthomonas campestris pv. Vesicatoria type A, Xanthomonas campestris pv. vesicatoria, Xanthomonas euvesicatoria Jones et al. 2006 emend. Constantin et al. 2016
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