STRINGSTRING
gumL gumL gumM gumM fliL fliL cyoC cyoC secE secE xcsN xcsN xcsG xcsG xopX xopX hrcU hrcU hrpE hrpE hpaB hpaB avrBs2 avrBs2 tatA tatA tatB tatB yapH yapH catB catB rpfB rpfB rimK rimK xopN xopN gumD gumD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gumLPolysaccharide biosynthesis protein GumL; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
gumMGlycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family. (264 aa)
fliLFlagellar basal body protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (175 aa)
cyoCCytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. (135 aa)
xcsNType II secretion system protein N; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
xcsGType II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
xopXType III secretion system effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa)
hrcUEscU/YscU/HrcU family type III secretion system export apparatus switch protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
hrpEHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (52 aa)
hpaB4-hydroxyphenylacetate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
avrBs2Avirulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (729 aa)
tatASec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (75 aa)
tatBTwin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (208 aa)
yapHHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2727 aa)
catBHypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family. (507 aa)
rpfBlong-chain-fatty-acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)
rimKRibosomal protein S6 modification protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
xopNType III secretion system effector protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (733 aa)
gumDUndecaprenyl-phosphate glucose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
Your Current Organism:
Xanthomonas euvesicatoria
NCBI taxonomy Id: 456327
Other names: ATCC 11633, Bacterium vesicatorium, DSM 19128, ICMP 109, ICMP 98, NCPPB 2968, X. euvesicatoria, Xanthomonas campestris (pv. vesicatoria), Xanthomonas campestris pv. Vesicatoria type A, Xanthomonas campestris pv. vesicatoria, Xanthomonas euvesicatoria Jones et al. 2006 emend. Constantin et al. 2016
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.