STRINGSTRING
Mboo_0678 Mboo_0678 Mboo_0707 Mboo_0707 Mboo_0932 Mboo_0932 Mboo_1199 Mboo_1199 Mboo_1283 Mboo_1283 gpmA gpmA Mboo_1525 Mboo_1525 pgk pgk tpiA tpiA fbp fbp Mboo_1611 Mboo_1611 fbp-2 fbp-2 pfkA pfkA eno eno Mboo_2325 Mboo_2325 pgk-2 pgk-2 gap gap
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mboo_0678Proposed homoserine kinase; KEGG: mhu:Mhun_0447 phosphonopyruvate decarboxylase-related protein; TIGRFAM: phosphonopyruvate decarboxylase-related protein; proposed homoserine kinase; PFAM: metalloenzyme domain protein. (383 aa)
Mboo_0707PFAM: Orotidine 5'-phosphate decarboxylase; Dimethylmenaquinone methyltransferase; KEGG: mhu:Mhun_0647 orotidine 5'-phosphate decarboxylase. (428 aa)
Mboo_0932Enolase; KEGG: deh:cbdb_A573 enolase. (55 aa)
Mboo_1199PFAM: sugar isomerase (SIS); KEGG: mhu:Mhun_0910 sugar isomerase (SIS). (191 aa)
Mboo_1283PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: cya:CYA_0020 glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (323 aa)
gpmAPhosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (249 aa)
Mboo_1525PFAM: ADP-specific phosphofructokinase/glucokinase; KEGG: pab:PAB0967 ADP-specific glucokinase. (417 aa)
pgkPFAM: phosphoglycerate kinase; KEGG: tte:TTE1761 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (395 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (229 aa)
fbpFructose-bisphosphatase; PFAM: Inositol phosphatase/fructose-1,6-bisphosphatase; KEGG: mhu:Mhun_1206 inositol phosphatase/fructose-1,6-bisphosphatase. (300 aa)
Mboo_1611KEGG: mbu:Mbur_1969 fructose-bisphosphate aldolase, class-II, putative. (379 aa)
fbp-2Protein of unknown function DUF100; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P). (365 aa)
pfkA6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. (351 aa)
enoPhosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (395 aa)
Mboo_2325PFAM: glucose-6-phosphate isomerase; KEGG: mhu:Mhun_2600 putative glucose-6-phosphate isomerase. (237 aa)
pgk-2PFAM: phosphoglycerate kinase; KEGG: mhu:Mhun_1194 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (404 aa)
gapKEGG: mhu:Mhun_2462 glyceraldehyde-3-phosphate dehydrogenase, type II; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase. (343 aa)
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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