STRINGSTRING
Mboo_0141 Mboo_0141 Mboo_0142 Mboo_0142 lon lon Mboo_0787 Mboo_0787 Mboo_0788 Mboo_0788 Mboo_0789 Mboo_0789 Mboo_0790 Mboo_0790 Mboo_0791 Mboo_0791 Mboo_0792 Mboo_0792 Mboo_0966 Mboo_0966 Mboo_0967 Mboo_0967 Mboo_0968 Mboo_0968 Mboo_0969 Mboo_0969 Mboo_0970 Mboo_0970 Mboo_0971 Mboo_0971 Mboo_0972 Mboo_0972 Mboo_0973 Mboo_0973 Mboo_0974 Mboo_0974 Mboo_0975 Mboo_0975 Mboo_1167 Mboo_1167 Mboo_1168 Mboo_1168 Mboo_1169 Mboo_1169 Mboo_1170 Mboo_1170 Mboo_1171 Mboo_1171 ftsZ ftsZ Mboo_1405 Mboo_1405 Mboo_1408 Mboo_1408 Mboo_1426 Mboo_1426 Mboo_1427 Mboo_1427 Mboo_1428 Mboo_1428 Mboo_1434 Mboo_1434 Mboo_1435 Mboo_1435 Mboo_1436 Mboo_1436 Mboo_1437 Mboo_1437 Mboo_1438 Mboo_1438 Mboo_1614 Mboo_1614 Mboo_1615 Mboo_1615 Mboo_1642 Mboo_1642 Mboo_1643 Mboo_1643 Mboo_1705 Mboo_1705 Mboo_1989 Mboo_1989 Mboo_1993 Mboo_1993
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mboo_0141KEGG: mhu:Mhun_1719 hypothetical protein. (187 aa)
Mboo_0142PFAM: regulatory protein, MarR; KEGG: mma:MM3117 transcriptional regulator, MarR family. (139 aa)
lonATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (794 aa)
Mboo_0787PFAM: PKD domain containing protein; PEGA domain protein; KEGG: mhu:Mhun_2840 PKD. (561 aa)
Mboo_0788PFAM: Cupin 2, conserved barrel domain protein; KEGG: mhu:Mhun_0538 cupin 2, conserved barrel. (111 aa)
Mboo_0789Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mtp:Mthe_0905 heavy metal translocating P-type ATPase. (820 aa)
Mboo_0790PFAM: YHS domain protein; SMART: TRASH domain protein; KEGG: mtp:Mthe_0904 YHS domain protein. (48 aa)
Mboo_0791KEGG: mhu:Mhun_0543 hypothetical protein. (222 aa)
Mboo_0792KEGG: mhu:Mhun_3136 hypothetical protein. (333 aa)
Mboo_0966KEGG: mac:MA1421 hypothetical protein. (80 aa)
Mboo_0967KEGG: mhu:Mhun_3149 uncharacterized membrane protein required for N-linked glycosylation-like. (83 aa)
Mboo_0968Hypothetical protein. (96 aa)
Mboo_0969KEGG: mbu:Mbur_0780 hypothetical protein. (146 aa)
Mboo_0970TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: mac:MA3477 ferrous iron transport protein B. (666 aa)
Mboo_0971PFAM: FeoA family protein; KEGG: mba:Mbar_A1451 hypothetical protein. (80 aa)
Mboo_0972PFAM: FeoA family protein; KEGG: mbu:Mbur_0777 FeoA. (94 aa)
Mboo_0973PFAM: iron dependent repressor; KEGG: afu:AF2395 iron-dependent repressor. (142 aa)
Mboo_0974Hypothetical protein. (86 aa)
Mboo_0975PFAM: high-affinity nickel-transporter; KEGG: sso:SSO1018 high-affinity nickel-transport protein (HoxN); Belongs to the NiCoT transporter (TC 2.A.52) family. (363 aa)
Mboo_1167PFAM: ABC-3 protein; KEGG: bxe:Bxe_A0715 ABC Mn2+/Zn2+ transporter, inner membrane subunit. (293 aa)
Mboo_1168PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pac:PPA0616 ABC transporter, ATP-binding protein. (265 aa)
Mboo_1169PFAM: periplasmic solute binding protein; KEGG: fra:Francci3_2479 periplasmic solute binding protein. (317 aa)
Mboo_1170PFAM: iron dependent repressor; KEGG: mba:Mbar_A0992 iron dependent repressor. (141 aa)
Mboo_1171Hypothetical protein. (96 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (388 aa)
Mboo_1405Putative transcriptional regulator, CopG/Arc/MetJ family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: mhu:Mhun_0941 putative transcriptional regulators, CopG/Arc/MetJ DNA-binding domain. (59 aa)
Mboo_1408PFAM: LOR/SDH bifunctional enzyme conserved domain protein; KEGG: mhu:Mhun_0938 hypothetical protein. (411 aa)
Mboo_1426Hypothetical protein. (166 aa)
Mboo_1427PFAM: regulatory protein, TetR; KEGG: mhu:Mhun_1656 transcriptional regulator, TetR family. (204 aa)
Mboo_1428KEGG: mhu:Mhun_1485 hypothetical protein. (180 aa)
Mboo_1434PFAM: natural resistance-associated macrophage protein; KEGG: sfu:Sfum_2395 natural resistance-associated macrophage protein. (422 aa)
Mboo_1435Hypothetical protein. (73 aa)
Mboo_1436MgtE intracellular region; PFAM: CBS domain containing protein; MgtE intracellular region; KEGG: sfu:Sfum_2396 CBS domain containing protein. (425 aa)
Mboo_1437PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mtp:Mthe_0487 methyltransferase type 11. (210 aa)
Mboo_1438KEGG: mhu:Mhun_1967 hypothetical protein. (184 aa)
Mboo_1614KEGG: mhu:Mhun_1204 hypothetical protein. (113 aa)
Mboo_1615Hypothetical protein. (176 aa)
Mboo_1642Hypothetical protein. (149 aa)
Mboo_1643Putative transcriptional regulator, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (140 aa)
Mboo_1705PFAM: regulatory protein, TetR; KEGG: mac:MA2951 transcriptional regulator, TetR family. (203 aa)
Mboo_1989Hypothetical protein. (99 aa)
Mboo_1993PFAM: regulatory protein, AsnC/Lrp family; KEGG: tko:TK1331 predicted transcription regulator, Lrp/AsnC family. (170 aa)
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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