STRINGSTRING
Mboo_1167 Mboo_1167 Mboo_1168 Mboo_1168 Mboo_1169 Mboo_1169 Mboo_1170 Mboo_1170 Mboo_1171 Mboo_1171
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mboo_1167PFAM: ABC-3 protein; KEGG: bxe:Bxe_A0715 ABC Mn2+/Zn2+ transporter, inner membrane subunit. (293 aa)
Mboo_1168PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pac:PPA0616 ABC transporter, ATP-binding protein. (265 aa)
Mboo_1169PFAM: periplasmic solute binding protein; KEGG: fra:Francci3_2479 periplasmic solute binding protein. (317 aa)
Mboo_1170PFAM: iron dependent repressor; KEGG: mba:Mbar_A0992 iron dependent repressor. (141 aa)
Mboo_1171Hypothetical protein. (96 aa)
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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