(7 nodes) U4 snRNP, and Sm-like protein Lsm6/SmF network (Cyphomyrmex costatus)

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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textmining

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protein homology

Your Input:
	ALC62_15272	Small nuclear ribonucleoprotein Sm D2. (134 aa)
	ALC62_08605	Putative small nuclear ribonucleoprotein G. (39 aa)
	ALC62_03560	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (116 aa)
	ALC62_13970	Small nuclear ribonucleoprotein Sm D3. (142 aa)
	ALC62_09810	Small nuclear ribonucleoprotein-associated protein. (208 aa)
	ALC62_08212	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	ALC62_07461	Uncharacterized protein. (578 aa)

Your Current Organism:

Cyphomyrmex costatus

NCBI taxonomy Id: 456900
Other names: C. costatus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC62_03560	ALC62_07461	A0A151IL76	A0A195CM27	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.999
ALC62_03560	ALC62_08212	A0A151IL76	A0A195CJT0	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
ALC62_03560	ALC62_08605	A0A151IL76	A0A151IGS8	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Putative small nuclear ribonucleoprotein G.	0.999
ALC62_03560	ALC62_09810	A0A151IL76	A0A195CHA4	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein-associated protein.	0.998
ALC62_03560	ALC62_13970	A0A151IL76	A0A195C4K5	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.999
ALC62_03560	ALC62_15272	A0A151IL76	A0A151I7C2	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
ALC62_07461	ALC62_03560	A0A195CM27	A0A151IL76	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
ALC62_07461	ALC62_08212	A0A195CM27	A0A195CJT0	Uncharacterized protein.	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
ALC62_07461	ALC62_08605	A0A195CM27	A0A151IGS8	Uncharacterized protein.	Putative small nuclear ribonucleoprotein G.	0.999
ALC62_07461	ALC62_09810	A0A195CM27	A0A195CHA4	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.999
ALC62_07461	ALC62_13970	A0A195CM27	A0A195C4K5	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.999
ALC62_07461	ALC62_15272	A0A195CM27	A0A151I7C2	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.999
ALC62_08212	ALC62_03560	A0A195CJT0	A0A151IL76	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
ALC62_08212	ALC62_07461	A0A195CJT0	A0A195CM27	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.999
ALC62_08212	ALC62_08605	A0A195CJT0	A0A151IGS8	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Putative small nuclear ribonucleoprotein G.	0.999
ALC62_08212	ALC62_09810	A0A195CJT0	A0A195CHA4	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein-associated protein.	0.999
ALC62_08212	ALC62_13970	A0A195CJT0	A0A195C4K5	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D3.	0.999
ALC62_08212	ALC62_15272	A0A195CJT0	A0A151I7C2	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D2.	0.999
ALC62_08605	ALC62_03560	A0A151IGS8	A0A151IL76	Putative small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
ALC62_08605	ALC62_07461	A0A151IGS8	A0A195CM27	Putative small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.999