(24 nodes) Mixed, incl. Virion, and MAPK signaling pathway - plant network (Cyphomyrmex costatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC62_15466	Putative RNA-binding protein 46. (466 aa)
	ALC62_11080	Protein tramtrack, alpha isoform. (596 aa)
	ALC62_11079	Protein bric-a-brac 1. (214 aa)
	ALC62_09879	Zinc finger Ran-binding domain-containing protein 2. (222 aa)
	ALC62_09583	Poly(RC)-binding protein 3. (621 aa)
	ALC62_09220	RNA-binding protein EWS. (419 aa)
	ALC62_07289	DNA-binding protein HEXBP. (384 aa)
	ALC62_00699	Heterogeneous nuclear ribonucleoprotein K. (388 aa)
	ALC62_03826	Uncharacterized protein. (195 aa)
	ALC62_15542	Y-box factor like protein. (333 aa)
	ALC62_14489	TAR DNA-binding protein 43. (489 aa)
	ALC62_14488	TAR DNA-binding protein 43. (284 aa)
	ALC62_13717	RNA-binding protein Raly. (132 aa)
	ALC62_13716	C2H2-type domain-containing protein. (509 aa)
	ALC62_12851	Heterogeneous nuclear ribonucleoprotein H2. (436 aa)
	ALC62_12603	Heterogeneous nuclear ribonucleoprotein U-like protein 1. (1015 aa)
	ALC62_07343	Heterogeneous nuclear ribonucleoprotein L. (210 aa)
	ALC62_07345	Heterogeneous nuclear ribonucleoprotein L. (376 aa)
	ALC62_05972	Myelin expression factor 2. (592 aa)
	ALC62_04290	RNA-binding protein Rsf1. (197 aa)
	ALC62_01282	Polypyrimidine tract-binding protein 2. (637 aa)
	ALC62_01280	Uncharacterized protein. (161 aa)
	ALC62_00394	Heterogeneous nuclear ribonucleoprotein A1, A2/B1 like protein. (420 aa)
	ALC62_00200	RING finger and SPRY domain-containing protein 1. (534 aa)

Your Current Organism:

Cyphomyrmex costatus

NCBI taxonomy Id: 456900
Other names: C. costatus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC62_00200	ALC62_00394	A0A195D8I4	A0A195D789	RING finger and SPRY domain-containing protein 1.	Heterogeneous nuclear ribonucleoprotein A1, A2/B1 like protein.	0.640
ALC62_00200	ALC62_00699	A0A195D8I4	A0A151IQA9	RING finger and SPRY domain-containing protein 1.	Heterogeneous nuclear ribonucleoprotein K.	0.890
ALC62_00200	ALC62_01280	A0A195D8I4	A0A195D5Q7	RING finger and SPRY domain-containing protein 1.	Uncharacterized protein.	0.662
ALC62_00200	ALC62_01282	A0A195D8I4	A0A195D4K2	RING finger and SPRY domain-containing protein 1.	Polypyrimidine tract-binding protein 2.	0.662
ALC62_00200	ALC62_03826	A0A195D8I4	A0A151K291	RING finger and SPRY domain-containing protein 1.	Uncharacterized protein.	0.640
ALC62_00200	ALC62_04290	A0A195D8I4	A0A195CWA0	RING finger and SPRY domain-containing protein 1.	RNA-binding protein Rsf1.	0.626
ALC62_00200	ALC62_05972	A0A195D8I4	A0A195CR35	RING finger and SPRY domain-containing protein 1.	Myelin expression factor 2.	0.894
ALC62_00200	ALC62_07289	A0A195D8I4	A0A151IHS6	RING finger and SPRY domain-containing protein 1.	DNA-binding protein HEXBP.	0.690
ALC62_00200	ALC62_07343	A0A195D8I4	A0A195CMB5	RING finger and SPRY domain-containing protein 1.	Heterogeneous nuclear ribonucleoprotein L.	0.806
ALC62_00200	ALC62_07345	A0A195D8I4	A0A195CMD0	RING finger and SPRY domain-containing protein 1.	Heterogeneous nuclear ribonucleoprotein L.	0.806
ALC62_00200	ALC62_09220	A0A195D8I4	A0A151IG62	RING finger and SPRY domain-containing protein 1.	RNA-binding protein EWS.	0.737
ALC62_00200	ALC62_09583	A0A195D8I4	A0A151IFY6	RING finger and SPRY domain-containing protein 1.	Poly(RC)-binding protein 3.	0.741
ALC62_00200	ALC62_09879	A0A195D8I4	A0A151IEX9	RING finger and SPRY domain-containing protein 1.	Zinc finger Ran-binding domain-containing protein 2.	0.737
ALC62_00200	ALC62_11079	A0A195D8I4	A0A151ID77	RING finger and SPRY domain-containing protein 1.	Protein bric-a-brac 1.	0.704
ALC62_00200	ALC62_11080	A0A195D8I4	A0A151ICZ3	RING finger and SPRY domain-containing protein 1.	Protein tramtrack, alpha isoform.	0.704
ALC62_00200	ALC62_12851	A0A195D8I4	A0A195C6J3	RING finger and SPRY domain-containing protein 1.	Heterogeneous nuclear ribonucleoprotein H2.	0.839
ALC62_00200	ALC62_13716	A0A195D8I4	A0A195C5Z8	RING finger and SPRY domain-containing protein 1.	C2H2-type domain-containing protein.	0.640
ALC62_00200	ALC62_13717	A0A195D8I4	A0A195C418	RING finger and SPRY domain-containing protein 1.	RNA-binding protein Raly.	0.640
ALC62_00200	ALC62_14488	A0A195D8I4	A0A195C3Z0	RING finger and SPRY domain-containing protein 1.	TAR DNA-binding protein 43.	0.640
ALC62_00200	ALC62_14489	A0A195D8I4	A0A195C1Z3	RING finger and SPRY domain-containing protein 1.	TAR DNA-binding protein 43.	0.640