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ALC62_14924 ALC62_14924 ALC62_14593 ALC62_14593 ALC62_14572 ALC62_14572 ALC62_14955 ALC62_14955 ALC62_15801 ALC62_15801 ALC62_15822 ALC62_15822 ALC62_03827 ALC62_03827 ALC62_03826 ALC62_03826 ALC62_00447 ALC62_00447 ALC62_00678 ALC62_00678 ALC62_00824 ALC62_00824 ALC62_01918 ALC62_01918 ALC62_02011 ALC62_02011 ALC62_02010 ALC62_02010 ALC62_03318 ALC62_03318 ALC62_03508 ALC62_03508 ALC62_03485 ALC62_03485 ALC62_03560 ALC62_03560 ALC62_03569 ALC62_03569 ALC62_03805 ALC62_03805 ALC62_05256 ALC62_05256 ALC62_05246 ALC62_05246 ALC62_05240 ALC62_05240 ALC62_05214 ALC62_05214 ALC62_05826 ALC62_05826 ALC62_06644 ALC62_06644 ALC62_06728 ALC62_06728 ALC62_07544 ALC62_07544 ALC62_07784 ALC62_07784 ALC62_08605 ALC62_08605 ALC62_08933 ALC62_08933 ALC62_08936 ALC62_08936 ALC62_08968 ALC62_08968 ALC62_11119 ALC62_11119 ALC62_09266 ALC62_09266 ALC62_09574 ALC62_09574 ALC62_09858 ALC62_09858 ALC62_09947 ALC62_09947 ALC62_11011 ALC62_11011 ALC62_12290 ALC62_12290 ALC62_12351 ALC62_12351 ALC62_12802 ALC62_12802 ALC62_13105 ALC62_13105 ALC62_15584 ALC62_15584 ALC62_13509 ALC62_13509 ALC62_15410 ALC62_15410 ALC62_15380 ALC62_15380 ALC62_15416 ALC62_15416 ALC62_15272 ALC62_15272 ALC62_14613 ALC62_14613 ALC62_14280 ALC62_14280 ALC62_14255 ALC62_14255 ALC62_13567 ALC62_13567 ALC62_09044 ALC62_09044 ALC62_12845 ALC62_12845 ALC62_13253 ALC62_13253 ALC62_13233 ALC62_13233 ALC62_13011 ALC62_13011 ALC62_12859 ALC62_12859 ALC62_13776 ALC62_13776 ALC62_13254 ALC62_13254 ALC62_13953 ALC62_13953 ALC62_13234 ALC62_13234 ALC62_13145 ALC62_13145 ALC62_14202 ALC62_14202 ALC62_13392 ALC62_13392 ALC62_13970 ALC62_13970 ALC62_14421 ALC62_14421 ALC62_13900 ALC62_13900 ALC62_14689 ALC62_14689 ALC62_14570 ALC62_14570 ALC62_14946 ALC62_14946 ALC62_00399 ALC62_00399 ALC62_00390 ALC62_00390 ALC62_00469 ALC62_00469 ALC62_00958 ALC62_00958 ALC62_01600 ALC62_01600 ALC62_01577 ALC62_01577 ALC62_02593 ALC62_02593 ALC62_02312 ALC62_02312 ALC62_02539 ALC62_02539 ALC62_03639 ALC62_03639 ALC62_03380 ALC62_03380 ALC62_03658 ALC62_03658 ALC62_04643 ALC62_04643 ALC62_04264 ALC62_04264 ALC62_04249 ALC62_04249 LSM4 LSM4 ALC62_04644 ALC62_04644 ALC62_04657 ALC62_04657 ALC62_05059 ALC62_05059 ALC62_05469 ALC62_05469 ALC62_05303 ALC62_05303 ALC62_05475 ALC62_05475 ALC62_06036 ALC62_06036 ALC62_06031 ALC62_06031 ALC62_05699 ALC62_05699 ALC62_05644 ALC62_05644 ALC62_06032 ALC62_06032 ALC62_06166 ALC62_06166 ALC62_06551 ALC62_06551 ALC62_06470 ALC62_06470 ALC62_06827 ALC62_06827 ALC62_07284 ALC62_07284 ALC62_07461 ALC62_07461 ALC62_07760 ALC62_07760 ALC62_08278 ALC62_08278 ALC62_08263 ALC62_08263 ALC62_08798 ALC62_08798 ALC62_08778 ALC62_08778 ALC62_08301 ALC62_08301 ALC62_08212 ALC62_08212 ALC62_08194 ALC62_08194 ALC62_08423 ALC62_08423 ALC62_09441 ALC62_09441 ALC62_09144 ALC62_09144 ALC62_09788 ALC62_09788 ALC62_09327 ALC62_09327 ALC62_10794 ALC62_10794 ALC62_11128 ALC62_11128 ALC62_10514 ALC62_10514 ALC62_10793 ALC62_10793 ALC62_11202 ALC62_11202 ALC62_11141 ALC62_11141 ALC62_11837 ALC62_11837 ALC62_11386 ALC62_11386
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC62_14924Uncharacterized protein C20orf4 like protein. (373 aa)
ALC62_1459328S ribosomal protein S7, mitochondrial. (173 aa)
ALC62_14572Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (894 aa)
ALC62_14955Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (428 aa)
ALC62_15801Nuclear fragile X mental retardation-interacting protein 1. (308 aa)
ALC62_15822U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1. (473 aa)
ALC62_03827Transformer-2 protein like protein beta. (280 aa)
ALC62_03826Uncharacterized protein. (195 aa)
ALC62_00447Gem-associated protein 5. (1320 aa)
ALC62_00678Pre-mRNA-splicing factor SLU7. (573 aa)
ALC62_00824Zinc finger HIT domain-containing protein 3. (137 aa)
ALC62_01918Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family. (444 aa)
ALC62_02011Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (443 aa)
ALC62_02010Putative RNA helicase armi. (1206 aa)
ALC62_03318Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5110 aa)
ALC62_03508tRNA selenocysteine 1-associated protein 1. (295 aa)
ALC62_03485Putative ATP-dependent RNA helicase DDX20. (1255 aa)
ALC62_03560Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (116 aa)
ALC62_03569Pre-mRNA-splicing factor SYF1. (829 aa)
ALC62_03805X-ray repair cross-complementing protein 5. (729 aa)
ALC62_05256Putative RNA-binding protein Luc7-like 1. (345 aa)
ALC62_05246Interferon-inducible double stranded RNA-dependent protein kinase activator A. (384 aa)
ALC62_05240Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (216 aa)
ALC62_05214Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (239 aa)
ALC62_05826SH2 domain-containing adapter protein F. (1157 aa)
ALC62_06644Serine/threonine-protein kinase SRPK1. (661 aa)
ALC62_06728Eukaryotic translation initiation factor 3 subunit M. (376 aa)
ALC62_0754440S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (311 aa)
ALC62_07784Survival of motor neuron protein-interacting protein 1. (203 aa)
ALC62_08605Putative small nuclear ribonucleoprotein G. (39 aa)
ALC62_0893339S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family. (154 aa)
ALC62_08936Prostaglandin E synthase 3. (158 aa)
ALC62_08968Suppressor of SWI4 1 like protein. (413 aa)
ALC62_11119Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (562 aa)
ALC62_09266Eukaryotic translation initiation factor 4H. (380 aa)
ALC62_09574Notchless protein like protein 1. (466 aa)
ALC62_09858Eukaryotic translation initiation factor 6. (265 aa)
ALC62_09947Splicing factor 3A subunit 2. (273 aa)
ALC62_11011Periodic tryptophan protein 2 like protein. (922 aa)
ALC62_12290Malignant T cell-amplified sequence 1. (189 aa)
ALC62_12351Tankyrase-1. (937 aa)
ALC62_1280240S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (216 aa)
ALC62_13105Uncharacterized protein. (953 aa)
ALC62_15584Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (336 aa)
ALC62_13509Protein SHQ1 like protein. (518 aa)
ALC62_15410mRNA turnover protein 4 like protein. (280 aa)
ALC62_15380U4/U6.U5 tri-snRNP-associated protein 2. (507 aa)
ALC62_15416MADF domain-containing protein. (324 aa)
ALC62_15272Small nuclear ribonucleoprotein Sm D2. (134 aa)
ALC62_14613Protein argonaute-2. (860 aa)
ALC62_14280Box C/D snoRNA protein 1. (345 aa)
ALC62_14255Midasin. (894 aa)
ALC62_13567Eukaryotic translation initiation factor 3 subunit A. (1120 aa)
ALC62_09044Parafibromin. (514 aa)
ALC62_12845Eukaryotic translation initiation factor 2 subunit 3, Y-linked. (725 aa)
ALC62_13253Uncharacterized protein. (178 aa)
ALC62_13233Uncharacterized protein. (113 aa)
ALC62_13011mTERF domain-containing protein 1, mitochondrial. (386 aa)
ALC62_12859F-box only protein 11. (917 aa)
ALC62_13776Density-regulated protein; Belongs to the DENR family. (182 aa)
ALC62_13254CUGBP Elav-like family member 4. (726 aa)
ALC62_1395340S ribosomal protein S19a. (153 aa)
ALC62_13234Uncharacterized protein. (260 aa)
ALC62_13145Poly(U)-binding-splicing factor half pint. (588 aa)
ALC62_14202PIH1 domain-containing protein 2. (666 aa)
ALC62_13392Ligatin. (570 aa)
ALC62_13970Small nuclear ribonucleoprotein Sm D3. (142 aa)
ALC62_14421Eukaryotic translation initiation factor 3 subunit L. (532 aa)
ALC62_13900H/ACA ribonucleoprotein complex non-core subunit NAF1. (574 aa)
ALC62_14689Pre-mRNA-processing factor 6. (931 aa)
ALC62_14570Uncharacterized protein. (113 aa)
ALC62_14946Eukaryotic translation initiation factor 2 subunit 2. (351 aa)
ALC62_00399Pre-mRNA-splicing factor ISY1 like protein. (187 aa)
ALC62_00390U4/U6 small nuclear ribonucleoprotein Prp31. (500 aa)
ALC62_00469Ribosomal RNA-processing protein 7 like protein A. (252 aa)
ALC62_00958Eukaryotic translation initiation factor 5. (445 aa)
ALC62_01600Uncharacterized protein. (342 aa)
ALC62_01577CUGBP Elav-like family member 2. (435 aa)
ALC62_02593Uncharacterized protein. (265 aa)
ALC62_02312Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (287 aa)
ALC62_02539PIH1 domain-containing protein 1. (300 aa)
ALC62_03639Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (228 aa)
ALC62_03380Putative ribosomal RNA methyltransferase CG11447. (246 aa)
ALC62_03658Splicing factor 3B subunit 1. (1303 aa)
ALC62_04643Uncharacterized protein. (961 aa)
ALC62_04264MADF domain-containing protein. (279 aa)
ALC62_04249Putative ATP-dependent RNA helicase DDX28. (576 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (125 aa)
ALC62_0464440S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (144 aa)
ALC62_04657Pre-rRNA-processing protein esf2. (217 aa)
ALC62_05059Protein argonaute-2; Belongs to the argonaute family. (929 aa)
ALC62_05469Eukaryotic translation initiation factor 3 subunit G. (287 aa)
ALC62_05303Ribosome production factor 2 like protein. (314 aa)
ALC62_05475Ribosome biogenesis protein BRX1 like protein. (348 aa)
ALC62_06036GTP-binding protein era like protein. (340 aa)
ALC62_06031DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (2439 aa)
ALC62_05699Pre-mRNA-splicing factor 18. (335 aa)
ALC62_0564460S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (285 aa)
ALC62_06032DNA-dependent protein kinase catalytic subunit. (1328 aa)
ALC62_06166Methylosome subunit pICln. (608 aa)
ALC62_06551Survival motor neuron protein. (204 aa)
ALC62_06470Protein crooked neck. (666 aa)
ALC62_06827Pre-mRNA-processing factor 39. (981 aa)
ALC62_07284Endoribonuclease Dcr-1; Belongs to the helicase family. Dicer subfamily. (1927 aa)
ALC62_07461Uncharacterized protein. (578 aa)
ALC62_0776030S ribosomal protein S11, chloroplastic. (209 aa)
ALC62_08278Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (322 aa)
ALC62_0826360S ribosomal protein L10. (222 aa)
ALC62_08798Peptidyl-prolyl cis-trans isomerase D. (378 aa)
ALC62_08778Protein suppressor of white apricot. (793 aa)
ALC62_0830160S ribosomal protein L10. (211 aa)
ALC62_08212Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
ALC62_08194BTB/POZ domain-containing protein 9. (480 aa)
ALC62_0842360S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (318 aa)
ALC62_09441MADF domain-containing protein. (375 aa)
ALC62_09144U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (175 aa)
ALC62_09788Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (285 aa)
ALC62_09327MADF domain-containing protein. (610 aa)
ALC62_10794Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (703 aa)
ALC62_11128Uncharacterized protein. (101 aa)
ALC62_10514Uncharacterized protein. (2133 aa)
ALC62_10793Luc7-like protein 3. (367 aa)
ALC62_1120260S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (227 aa)
ALC62_1114140S ribosomal protein S19a. (154 aa)
ALC62_1183740S ribosomal protein S27. (85 aa)
ALC62_11386Pre-mRNA-processing-splicing factor 8. (2372 aa)
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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