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ALC62_14613 ALC62_14613 ALC62_15171 ALC62_15171 ALC62_15307 ALC62_15307 ALC62_15218 ALC62_15218 ALC62_15706 ALC62_15706 ALC62_15735 ALC62_15735 ALC62_15733 ALC62_15733 ALC62_10677 ALC62_10677 ALC62_03247 ALC62_03247 ALC62_02762 ALC62_02762 ALC62_06003 ALC62_06003 ALC62_14896 ALC62_14896 ALC62_14719 ALC62_14719 ALC62_14396 ALC62_14396 ALC62_13732 ALC62_13732 ALC62_14071 ALC62_14071 ALC62_11992 ALC62_11992 ALC62_12428 ALC62_12428 ALC62_00345 ALC62_00345 ALC62_00503 ALC62_00503 ALC62_00509 ALC62_00509 ALC62_00956 ALC62_00956 ALC62_01441 ALC62_01441 ALC62_01577 ALC62_01577 ALC62_02342 ALC62_02342 ALC62_02242 ALC62_02242 ALC62_12726 ALC62_12726 ALC62_12820 ALC62_12820 ALC62_13058 ALC62_13058 LSM3 LSM3 ALC62_13497 ALC62_13497 ALC62_13627 ALC62_13627 ALC62_13676 ALC62_13676 ALC62_14055 ALC62_14055 ALC62_14278 ALC62_14278 ALC62_14291 ALC62_14291 ALC62_14624 ALC62_14624 ALC62_02008 ALC62_02008 ALC62_09937 ALC62_09937 ALC62_09971 ALC62_09971 ALC62_09933 ALC62_09933 ALC62_09938 ALC62_09938 ALC62_09744 ALC62_09744 ALC62_09245 ALC62_09245 ALC62_08605 ALC62_08605 ALC62_09428 ALC62_09428 ALC62_09139 ALC62_09139 ALC62_08885 ALC62_08885 ALC62_08813 ALC62_08813 ALC62_09136 ALC62_09136 ALC62_09182 ALC62_09182 ALC62_08120 ALC62_08120 ALC62_08161 ALC62_08161 ALC62_08167 ALC62_08167 ALC62_07720 ALC62_07720 ALC62_06737 ALC62_06737 ALC62_06202 ALC62_06202 ALC62_06229 ALC62_06229 ALC62_06200 ALC62_06200 ALC62_11699 ALC62_11699 PAN3 PAN3 ALC62_12041 ALC62_12041 ALC62_11209 ALC62_11209 ALC62_02010 ALC62_02010 ALC62_01961 ALC62_01961 ALC62_01918 ALC62_01918 ALC62_06889 ALC62_06889 ALC62_15548 ALC62_15548 ALC62_15542 ALC62_15542 LSM1 LSM1 ALC62_04426 ALC62_04426 ALC62_05816 ALC62_05816 ALC62_06272 ALC62_06272 ALC62_07131 ALC62_07131 ALC62_07769 ALC62_07769 ALC62_08077 ALC62_08077 ALC62_05692 ALC62_05692 ALC62_04867 ALC62_04867 ALC62_05059 ALC62_05059 LSM4 LSM4 ALC62_06203 ALC62_06203 ALC62_04758 ALC62_04758 ALC62_02936 ALC62_02936 ALC62_00225 ALC62_00225 ALC62_02928 ALC62_02928 ALC62_02697 ALC62_02697 ALC62_02735 ALC62_02735 ALC62_02461 ALC62_02461 ALC62_02341 ALC62_02341 ALC62_02206 ALC62_02206 ALC62_10169 ALC62_10169 ALC62_09944 ALC62_09944 ALC62_09936 ALC62_09936 ALC62_10025 ALC62_10025 ALC62_10074 ALC62_10074 ALC62_10422 ALC62_10422 ALC62_10764 ALC62_10764 ALC62_11081 ALC62_11081 ALC62_11058 ALC62_11058 ALC62_11473 ALC62_11473 ALC62_12090 ALC62_12090
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC62_14613Protein argonaute-2. (860 aa)
ALC62_15171CCR4-NOT transcription complex subunit 3. (686 aa)
ALC62_15307Ras GTPase-activating protein-binding protein 1. (638 aa)
ALC62_152185'-3' exoribonuclease 1. (1673 aa)
ALC62_15706Fragile X mental retardation syndrome-related protein 1. (594 aa)
ALC62_15735mRNA-decapping enzyme 2. (127 aa)
ALC62_15733mRNA-decapping enzyme 2. (402 aa)
ALC62_10677Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family. (861 aa)
ALC62_03247Protein TBRG4. (545 aa)
ALC62_02762Uncharacterized protein F58A4.6. (275 aa)
ALC62_06003RNA-binding protein MEX3B. (420 aa)
ALC62_14896Uncharacterized protein. (1181 aa)
ALC62_14719DEAD-box helicase Dbp80. (481 aa)
ALC62_14396CCR4-NOT transcription complex subunit 2. (461 aa)
ALC62_13732Small ubiquitin-related modifier. (136 aa)
ALC62_14071E3 ubiquitin-protein ligase UBR4. (5194 aa)
ALC62_11992CHK domain-containing protein. (2447 aa)
ALC62_12428Uncharacterized protein K02A2.6. (371 aa)
ALC62_00345PAB-dependent poly(A)-specific ribonuclease subunit 2. (1297 aa)
ALC62_00503B box-type domain-containing protein. (325 aa)
ALC62_00509RING finger protein 17. (1441 aa)
ALC62_00956RNA pseudouridylate synthase domain-containing protein 4. (372 aa)
ALC62_01441Enhancer of mRNA-decapping protein 4. (1051 aa)
ALC62_01577CUGBP Elav-like family member 2. (435 aa)
ALC62_02342Uncharacterized protein. (717 aa)
ALC62_02242Tudor domain-containing protein. (204 aa)
ALC62_12726Methylosome protein 50. (328 aa)
ALC62_12820Uncharacterized protein K02A2.6. (392 aa)
ALC62_13058Uncharacterized protein. (1267 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (100 aa)
ALC62_13497Eukaryotic translation initiation factor 4E transporter. (1350 aa)
ALC62_13627Xaa-Pro dipeptidase. (963 aa)
ALC62_13676CCR4-NOT transcription complex subunit 7. (290 aa)
ALC62_14055HTH La-type RNA-binding domain-containing protein. (850 aa)
ALC62_14278Protein transport protein Sec16A. (2441 aa)
ALC62_14291DIS3-like exonuclease 2; Belongs to the RNR ribonuclease family. (945 aa)
ALC62_14624mRNA-decapping enzyme 2. (251 aa)
ALC62_02008Maternal protein tudor. (2618 aa)
ALC62_09937Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
ALC62_09971Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family. (418 aa)
ALC62_09933Uncharacterized protein. (474 aa)
ALC62_09938Tudor domain-containing protein 7. (1097 aa)
ALC62_09744Roquin. (991 aa)
ALC62_09245Protein CASC3. (791 aa)
ALC62_08605Putative small nuclear ribonucleoprotein G. (39 aa)
ALC62_09428Putative helicase with zinc finger domain. (909 aa)
ALC62_09139Pumilio like protein 2. (588 aa)
ALC62_08885DNA-directed RNA polymerase II subunit RPB7. (268 aa)
ALC62_08813mRNA-decapping enzyme 2. (214 aa)
ALC62_09136Maternal protein pumilio. (810 aa)
ALC62_09182Scavenger mRNA-decapping enzyme DcpS. (347 aa)
ALC62_08120CCR4-NOT transcription complex subunit 1. (2373 aa)
ALC62_08161Double-stranded RNA-binding protein Staufen like protein 2. (802 aa)
ALC62_08167Protein LSM14 like protein B. (562 aa)
ALC62_07720Regulator of nonsense transcripts 1. (1120 aa)
ALC62_06737Putative tRNA pseudouridine synthase 2. (318 aa)
ALC62_06202Uncharacterized protein. (70 aa)
ALC62_06229Protein piwi. (2060 aa)
ALC62_06200RNA-binding protein 9. (373 aa)
ALC62_11699Enhancer of mRNA-decapping protein 3. (468 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (662 aa)
ALC62_12041ATP-dependent RNA helicase bel; Belongs to the DEAD box helicase family. (711 aa)
ALC62_11209Putative ribonuclease ZC3H12B. (451 aa)
ALC62_02010Putative RNA helicase armi. (1206 aa)
ALC62_01961U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (79 aa)
ALC62_01918Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family. (444 aa)
ALC62_06889Zinc finger CCHC domain-containing protein 13. (619 aa)
ALC62_15548Cell differentiation protein RCD1 like protein. (508 aa)
ALC62_15542Y-box factor like protein. (333 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (138 aa)
ALC62_04426AN1-type zinc finger protein 1. (270 aa)
ALC62_05816Putative ATP-dependent RNA helicase YTHDC2. (1153 aa)
ALC62_06272DNA methyltransferase like protein pmt1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (275 aa)
ALC62_07131La-related protein. (1413 aa)
ALC62_07769Sex-lethal like protein. (320 aa)
ALC62_08077DNA polymerase iota. (577 aa)
ALC62_05692Heterogeneous nuclear ribonucleoprotein Q. (709 aa)
ALC62_048672-oxoglutarate and iron-dependent oxygenase domain-containing protein 1. (562 aa)
ALC62_05059Protein argonaute-2; Belongs to the argonaute family. (929 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (125 aa)
ALC62_06203Uncharacterized protein. (217 aa)
ALC62_04758mRNA-decapping enzyme 1A. (452 aa)
ALC62_02936Protein PAT1 like protein 1. (658 aa)
ALC62_00225Uncharacterized protein. (117 aa)
ALC62_02928NF-kappa-B inhibitor zeta. (989 aa)
ALC62_02697Wilms tumor protein 1-interacting protein like protein. (886 aa)
ALC62_02735Importin subunit beta-1. (877 aa)
ALC62_02461Maternal protein exuperantia. (416 aa)
ALC62_02341Tudor domain-containing protein 5. (1396 aa)
ALC62_02206FAST kinase domain-containing protein 5. (668 aa)
ALC62_10169Nucleolysin TIA-1. (311 aa)
ALC62_09944Putative helicase mov-10-B.1. (721 aa)
ALC62_09936Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
ALC62_10025mRNA-decapping enzyme 2. (202 aa)
ALC62_10074Ubiquitin carboxyl-terminal hydrolase. (552 aa)
ALC62_10422Heterogeneous nuclear ribonucleoprotein 27C. (400 aa)
ALC62_10764Tudor domain-containing protein. (214 aa)
ALC62_11081Nanos like protein 1; Belongs to the nanos family. (243 aa)
ALC62_11058Cytoplasmic polyadenylation element-binding protein 1-B. (673 aa)
ALC62_11473Uncharacterized protein. (197 aa)
ALC62_12090Uncharacterized protein. (894 aa)
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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