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ALC62_07345 ALC62_07345 ALC62_15494 ALC62_15494 ALC62_15466 ALC62_15466 ALC62_15274 ALC62_15274 ALC62_15307 ALC62_15307 ALC62_15242 ALC62_15242 ALC62_15252 ALC62_15252 ALC62_15058 ALC62_15058 ALC62_15056 ALC62_15056 ALC62_14623 ALC62_14623 ALC62_14222 ALC62_14222 ALC62_14055 ALC62_14055 ALC62_13595 ALC62_13595 ALC62_12777 ALC62_12777 ALC62_12340 ALC62_12340 ALC62_12286 ALC62_12286 ALC62_12162 ALC62_12162 ALC62_11956 ALC62_11956 ALC62_11058 ALC62_11058 ALC62_10965 ALC62_10965 ALC62_11015 ALC62_11015 ALC62_10422 ALC62_10422 ALC62_10240 ALC62_10240 ALC62_10041 ALC62_10041 ALC62_10044 ALC62_10044 ALC62_09990 ALC62_09990 ALC62_09936 ALC62_09936 ALC62_09937 ALC62_09937 ALC62_09943 ALC62_09943 ALC62_09214 ALC62_09214 ALC62_09257 ALC62_09257 ALC62_09244 ALC62_09244 ALC62_09266 ALC62_09266 ALC62_09053 ALC62_09053 ALC62_09220 ALC62_09220 ALC62_09015 ALC62_09015 ALC62_08979 ALC62_08979 ALC62_08981 ALC62_08981 ALC62_08704 ALC62_08704 ALC62_08562 ALC62_08562 ALC62_07769 ALC62_07769 ALC62_07782 ALC62_07782 ALC62_07048 ALC62_07048 ALC62_07488 ALC62_07488 ALC62_06698 ALC62_06698 ALC62_06718 ALC62_06718 ALC62_06667 ALC62_06667 ALC62_06316 ALC62_06316 ALC62_05265 ALC62_05265 ALC62_04134 ALC62_04134 ALC62_03794 ALC62_03794 ALC62_03508 ALC62_03508 ALC62_03146 ALC62_03146 ALC62_03119 ALC62_03119 ALC62_01982 ALC62_01982 ALC62_01975 ALC62_01975 ALC62_01832 ALC62_01832 ALC62_01867 ALC62_01867 ALC62_00639 ALC62_00639 ALC62_03827 ALC62_03827 ALC62_15822 ALC62_15822 ALC62_15885 ALC62_15885 ALC62_15026 ALC62_15026 ALC62_14848 ALC62_14848 ALC62_14973 ALC62_14973 ALC62_14489 ALC62_14489 ALC62_14706 ALC62_14706 ALC62_14896 ALC62_14896 ALC62_14535 ALC62_14535 ALC62_13872 ALC62_13872 ALC62_14488 ALC62_14488 ALC62_13717 ALC62_13717 ALC62_13739 ALC62_13739 ALC62_13752 ALC62_13752 ALC62_13145 ALC62_13145 ALC62_13210 ALC62_13210 ALC62_13254 ALC62_13254 ALC62_13733 ALC62_13733 ALC62_12963 ALC62_12963 ALC62_12851 ALC62_12851 ALC62_13361 ALC62_13361 ALC62_13394 ALC62_13394 ALC62_13164 ALC62_13164 ALC62_13207 ALC62_13207 ALC62_12577 ALC62_12577 ALC62_12222 ALC62_12222 ALC62_11992 ALC62_11992 ALC62_12528 ALC62_12528 ALC62_11826 ALC62_11826 ALC62_12244 ALC62_12244 ALC62_11365 ALC62_11365 ALC62_12011 ALC62_12011 ALC62_11286 ALC62_11286 ALC62_10524 ALC62_10524 ALC62_11332 ALC62_11332 ALC62_11324 ALC62_11324 ALC62_10166 ALC62_10166 ALC62_10086 ALC62_10086 ALC62_10169 ALC62_10169 ALC62_10794 ALC62_10794 ALC62_09423 ALC62_09423 ALC62_09425 ALC62_09425 ALC62_08031 ALC62_08031 ALC62_08035 ALC62_08035 ALC62_07447 ALC62_07447 ALC62_08006 ALC62_08006 ALC62_08037 ALC62_08037 ALC62_07343 ALC62_07343 ALC62_07244 ALC62_07244 ALC62_06200 ALC62_06200 ALC62_05972 ALC62_05972 ALC62_06059 ALC62_06059 ALC62_05692 ALC62_05692 ALC62_05674 ALC62_05674 ALC62_05469 ALC62_05469 ALC62_04755 ALC62_04755 ALC62_05304 ALC62_05304 ALC62_04770 ALC62_04770 ALC62_05337 ALC62_05337 ALC62_04657 ALC62_04657 ALC62_04179 ALC62_04179 ALC62_04290 ALC62_04290 ALC62_04380 ALC62_04380 ALC62_03627 ALC62_03627 ALC62_02902 ALC62_02902 ALC62_02907 ALC62_02907 ALC62_02494 ALC62_02494 ALC62_02297 ALC62_02297 ALC62_02312 ALC62_02312 ALC62_02286 ALC62_02286 ALC62_01577 ALC62_01577 ALC62_01446 ALC62_01446 ALC62_01281 ALC62_01281 ALC62_01282 ALC62_01282 ALC62_00469 ALC62_00469 ALC62_00521 ALC62_00521 ALC62_00510 ALC62_00510 ALC62_00394 ALC62_00394 ALC62_00233 ALC62_00233 ALC62_00310 ALC62_00310
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC62_07345Heterogeneous nuclear ribonucleoprotein L. (376 aa)
ALC62_15494Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (165 aa)
ALC62_15466Putative RNA-binding protein 46. (466 aa)
ALC62_15274Putative RNA-binding protein 19. (874 aa)
ALC62_15307Ras GTPase-activating protein-binding protein 1. (638 aa)
ALC62_15242RNA-binding protein 45. (483 aa)
ALC62_15252Splicing factor U2af 38 kDa subunit. (240 aa)
ALC62_15058HIV Tat-specific factor 1 like protein. (243 aa)
ALC62_15056HIV Tat-specific factor 1. (235 aa)
ALC62_14623Protein painting of fourth. (616 aa)
ALC62_14222Putative RNA-binding protein 15B. (772 aa)
ALC62_14055HTH La-type RNA-binding domain-containing protein. (850 aa)
ALC62_13595Negative elongation factor E. (271 aa)
ALC62_12777RNA-binding protein 47. (305 aa)
ALC62_12340La protein like protein. (432 aa)
ALC62_12286Protein sarah. (255 aa)
ALC62_12162Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (481 aa)
ALC62_11956Protein xmas-2. (1639 aa)
ALC62_11058Cytoplasmic polyadenylation element-binding protein 1-B. (673 aa)
ALC62_10965Putative RNA-binding protein orb2. (373 aa)
ALC62_11015Squamous cell carcinoma antigen recognized by T-cells 3. (906 aa)
ALC62_10422Heterogeneous nuclear ribonucleoprotein 27C. (400 aa)
ALC62_10240MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein. (138 aa)
ALC62_10041Nuclear RNA export factor 1. (475 aa)
ALC62_10044Nuclear RNA export factor 1. (558 aa)
ALC62_09990Putative RNA-binding protein 16. (1472 aa)
ALC62_09936Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
ALC62_09937Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
ALC62_09943Regulator of nonsense transcripts 3A. (705 aa)
ALC62_09214RNA-binding protein squid. (311 aa)
ALC62_09257RNA-binding protein 26. (917 aa)
ALC62_09244RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (157 aa)
ALC62_09266Eukaryotic translation initiation factor 4H. (380 aa)
ALC62_09053Limkain-b1. (1656 aa)
ALC62_09220RNA-binding protein EWS. (419 aa)
ALC62_09015Growth inhibition and differentiation-related protein 88 like protein. (610 aa)
ALC62_08979Putative RNA-binding protein 18. (184 aa)
ALC62_08981Nuclear RNA export factor 1. (550 aa)
ALC62_08704Nuclear RNA export factor 1. (282 aa)
ALC62_08562Histone-lysine N-methyltransferase SETD1B. (1486 aa)
ALC62_07769Sex-lethal like protein. (320 aa)
ALC62_07782Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (159 aa)
ALC62_07048Uncharacterized protein. (962 aa)
ALC62_07488Nuclear RNA export factor 1. (519 aa)
ALC62_06698RNA-binding protein 42. (312 aa)
ALC62_06718Serine/arginine-rich splicing factor 7. (207 aa)
ALC62_06667U6 snRNA-specific terminal uridylyltransferase 1. (727 aa)
ALC62_06316RRM domain-containing protein. (1206 aa)
ALC62_05265Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (315 aa)
ALC62_04134Splicing factor U2af 38 kDa subunit. (240 aa)
ALC62_03794RNA-binding protein Musashi like protein Rbp6. (416 aa)
ALC62_03508tRNA selenocysteine 1-associated protein 1. (295 aa)
ALC62_03146Replicase polyprotein 1a. (485 aa)
ALC62_03119Serrate RNA effector molecule like protein. (931 aa)
ALC62_01982RNA-binding protein 28. (783 aa)
ALC62_01975Protein painting of fourth. (702 aa)
ALC62_01832Pre-mRNA branch site p14-like protein. (114 aa)
ALC62_01867RRM domain-containing protein. (524 aa)
ALC62_00639Peroxisome proliferator-activated receptor gamma coactivator-related protein 1. (1025 aa)
ALC62_03827Transformer-2 protein like protein beta. (280 aa)
ALC62_15822U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1. (473 aa)
ALC62_15885Putative splicing factor, arginine/serine-rich 7. (496 aa)
ALC62_15026Polyadenylate-binding protein 2. (355 aa)
ALC62_14848RNA-binding protein 12. (900 aa)
ALC62_14973RNA-binding protein 5. (916 aa)
ALC62_14489TAR DNA-binding protein 43. (489 aa)
ALC62_14706UPF0712 protein C7orf64 like protein. (359 aa)
ALC62_14896Uncharacterized protein. (1181 aa)
ALC62_14535Nuclear RNA export factor 1. (529 aa)
ALC62_13872Uncharacterized protein. (4386 aa)
ALC62_14488TAR DNA-binding protein 43. (284 aa)
ALC62_13717RNA-binding protein Raly. (132 aa)
ALC62_13739RNA-binding protein squid. (354 aa)
ALC62_13752Polymerase delta-interacting protein 3. (422 aa)
ALC62_13145Poly(U)-binding-splicing factor half pint. (588 aa)
ALC62_13210Splicing factor 45. (384 aa)
ALC62_13254CUGBP Elav-like family member 4. (726 aa)
ALC62_13733Alkylated DNA repair protein alkB like protein 8. (611 aa)
ALC62_12963Serine-arginine protein 55. (727 aa)
ALC62_12851Heterogeneous nuclear ribonucleoprotein H2. (436 aa)
ALC62_13361U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (181 aa)
ALC62_13394ELAV-like protein 4. (588 aa)
ALC62_13164CCR4-NOT transcription complex subunit 4. (1297 aa)
ALC62_13207U2 small nuclear ribonucleoprotein B. (231 aa)
ALC62_12577RNA-binding protein 40. (355 aa)
ALC62_12222Hrp65 protein. (629 aa)
ALC62_11992CHK domain-containing protein. (2447 aa)
ALC62_12528Insulin-like growth factor 2 mRNA-binding protein 1. (558 aa)
ALC62_11826RNA-binding protein squid. (295 aa)
ALC62_12244RNA-binding protein 25. (863 aa)
ALC62_11365U1 small nuclear ribonucleoprotein 70 kDa. (405 aa)
ALC62_12011RNA-binding protein 38. (413 aa)
ALC62_11286Protein alan shepard. (382 aa)
ALC62_10524Putative RNA-binding protein 11. (229 aa)
ALC62_11332Pre-mRNA-splicing factor RBM22. (449 aa)
ALC62_11324Nucleolysin TIAR. (393 aa)
ALC62_10166Nucleolysin TIA-1 isoform p40. (552 aa)
ALC62_10086RNA-binding protein 14. (392 aa)
ALC62_10169Nucleolysin TIA-1. (311 aa)
ALC62_10794Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (703 aa)
ALC62_09423RNA-binding motif protein, X-linked 2. (144 aa)
ALC62_09425RNA-binding protein 34. (633 aa)
ALC62_08031RNA-binding protein Musashi like protein Rbp6. (139 aa)
ALC62_08035RNA-binding protein Musashi like protein Rbp6. (273 aa)
ALC62_07447DnaJ like protein subfamily C member 17. (324 aa)
ALC62_08006Apoptotic chromatin condensation inducer in the nucleus. (872 aa)
ALC62_08037RNA-binding protein Musashi like protein Rbp6. (221 aa)
ALC62_07343Heterogeneous nuclear ribonucleoprotein L. (210 aa)
ALC62_07244Ecto-NOX disulfide-thiol exchanger 1. (780 aa)
ALC62_06200RNA-binding protein 9. (373 aa)
ALC62_05972Myelin expression factor 2. (592 aa)
ALC62_06059RNA-binding protein 1. (301 aa)
ALC62_05692Heterogeneous nuclear ribonucleoprotein Q. (709 aa)
ALC62_05674Putative RNA-binding protein EEED8.10. (574 aa)
ALC62_05469Eukaryotic translation initiation factor 3 subunit G. (287 aa)
ALC62_04755Splicing factor 3B subunit 4. (410 aa)
ALC62_05304Diacylglycerol kinase. (985 aa)
ALC62_04770Nuclear receptor coactivator 5. (668 aa)
ALC62_05337RNA-binding protein 39. (526 aa)
ALC62_04657Pre-rRNA-processing protein esf2. (217 aa)
ALC62_04179Zinc finger CCHC-type and RNA-binding motif-containing protein 1. (230 aa)
ALC62_04290RNA-binding protein Rsf1. (197 aa)
ALC62_04380BRCA1-associated protein. (532 aa)
ALC62_03627tRNA (Uracil-5-)-methyltransferase like protein A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (575 aa)
ALC62_02902Synaptojanin-1. (1044 aa)
ALC62_02907Nuclear RNA export factor 1. (645 aa)
ALC62_02494RNA and export factor-binding protein 2. (250 aa)
ALC62_02297Serine/arginine-rich splicing factor 2. (194 aa)
ALC62_02312Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (287 aa)
ALC62_02286RRM domain-containing protein. (1086 aa)
ALC62_01577CUGBP Elav-like family member 2. (435 aa)
ALC62_01446RNA-binding protein with serine-rich domain 1. (326 aa)
ALC62_01281Polypyrimidine tract-binding protein 1. (145 aa)
ALC62_01282Polypyrimidine tract-binding protein 2. (637 aa)
ALC62_00469Ribosomal RNA-processing protein 7 like protein A. (252 aa)
ALC62_00521Inner nuclear membrane protein Man1. (834 aa)
ALC62_00510Cleavage stimulation factor subunit 2. (491 aa)
ALC62_00394Heterogeneous nuclear ribonucleoprotein A1, A2/B1 like protein. (420 aa)
ALC62_00233Protein couch potato. (275 aa)
ALC62_00310U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (457 aa)
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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