(11 nodes) Oligonucleotide/oligosaccharide-binding (OB)-fold network (Cyphomyrmex costatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC62_04889	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (885 aa)
	ALC62_10746	Dual oxidase 2. (2386 aa)
	ALC62_03142	Putative ATP-dependent RNA helicase DHX35. (1047 aa)
	ALC62_03895	Putative ATP-dependent RNA helicase DHX33. (692 aa)
	ALC62_05816	Putative ATP-dependent RNA helicase YTHDC2. (1153 aa)
	ALC62_10428	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (1038 aa)
	ALC62_01734	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1132 aa)
	ALC62_01502	Dosage compensation regulator. (1246 aa)
	ALC62_14103	Putative ATP-dependent RNA helicase DHX36. (893 aa)
	ALC62_13384	ATP-dependent RNA helicase DHX8. (1203 aa)
	ALC62_07939	Putative ATP-dependent RNA helicase kurz. (1185 aa)

Your Current Organism:

Cyphomyrmex costatus

NCBI taxonomy Id: 456900
Other names: C. costatus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC62_01502	ALC62_04889	A0A195D312	A0A195CVD1	Dosage compensation regulator.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.	0.545
ALC62_01502	ALC62_05816	A0A195D312	A0A151IJR0	Dosage compensation regulator.	Putative ATP-dependent RNA helicase YTHDC2.	0.820
ALC62_01502	ALC62_10428	A0A195D312	A0A151IDW4	Dosage compensation regulator.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	0.439
ALC62_01502	ALC62_14103	A0A195D312	A0A195C4V7	Dosage compensation regulator.	Putative ATP-dependent RNA helicase DHX36.	0.700
ALC62_01734	ALC62_03142	A0A195D3R1	A0A151ILY1	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Putative ATP-dependent RNA helicase DHX35.	0.903
ALC62_01734	ALC62_03895	A0A195D3R1	A0A151IKT8	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Putative ATP-dependent RNA helicase DHX33.	0.888
ALC62_01734	ALC62_04889	A0A195D3R1	A0A195CVD1	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.	0.983
ALC62_01734	ALC62_10428	A0A195D3R1	A0A151IDW4	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	0.644
ALC62_01734	ALC62_13384	A0A195D3R1	A0A195C6Y5	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	ATP-dependent RNA helicase DHX8.	0.897
ALC62_03142	ALC62_01734	A0A151ILY1	A0A195D3R1	Putative ATP-dependent RNA helicase DHX35.	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	0.903
ALC62_03142	ALC62_04889	A0A151ILY1	A0A195CVD1	Putative ATP-dependent RNA helicase DHX35.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.	0.724
ALC62_03142	ALC62_05816	A0A151ILY1	A0A151IJR0	Putative ATP-dependent RNA helicase DHX35.	Putative ATP-dependent RNA helicase YTHDC2.	0.429
ALC62_03142	ALC62_07939	A0A151ILY1	A0A195CKR7	Putative ATP-dependent RNA helicase DHX35.	Putative ATP-dependent RNA helicase kurz.	0.914
ALC62_03142	ALC62_10428	A0A151ILY1	A0A151IDW4	Putative ATP-dependent RNA helicase DHX35.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	0.948
ALC62_03895	ALC62_01734	A0A151IKT8	A0A195D3R1	Putative ATP-dependent RNA helicase DHX33.	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	0.888
ALC62_03895	ALC62_04889	A0A151IKT8	A0A195CVD1	Putative ATP-dependent RNA helicase DHX33.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.	0.715
ALC62_03895	ALC62_07939	A0A151IKT8	A0A195CKR7	Putative ATP-dependent RNA helicase DHX33.	Putative ATP-dependent RNA helicase kurz.	0.908
ALC62_03895	ALC62_10428	A0A151IKT8	A0A151IDW4	Putative ATP-dependent RNA helicase DHX33.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.	0.945
ALC62_04889	ALC62_01502	A0A195CVD1	A0A195D312	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.	Dosage compensation regulator.	0.545
ALC62_04889	ALC62_01734	A0A195CVD1	A0A195D3R1	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	0.983