STRINGSTRING
ALC62_05761 ALC62_05761 ALC62_09423 ALC62_09423 ALC62_09819 ALC62_09819 ALC62_09821 ALC62_09821 ALC62_11408 ALC62_11408 ALC62_11295 ALC62_11295 ALC62_12231 ALC62_12231 ALC62_12675 ALC62_12675 ALC62_12611 ALC62_12611 ALC62_12968 ALC62_12968 ALC62_12953 ALC62_12953 ALC62_13904 ALC62_13904 ALC62_13898 ALC62_13898 ALC62_13752 ALC62_13752 ALC62_14488 ALC62_14488 ALC62_13902 ALC62_13902 ALC62_14719 ALC62_14719 ALC62_14185 ALC62_14185 ALC62_14535 ALC62_14535 ALC62_14390 ALC62_14390 ALC62_14489 ALC62_14489 ALC62_14683 ALC62_14683 ALC62_15026 ALC62_15026 ALC62_15881 ALC62_15881 ALC62_12654 ALC62_12654 ALC62_00113 ALC62_00113 ALC62_00454 ALC62_00454 ALC62_00599 ALC62_00599 ALC62_00827 ALC62_00827 ALC62_01975 ALC62_01975 ALC62_02038 ALC62_02038 ALC62_03022 ALC62_03022 ALC62_03083 ALC62_03083 ALC62_03052 ALC62_03052 ALC62_03506 ALC62_03506 ALC62_03759 ALC62_03759 ALC62_03794 ALC62_03794 ALC62_03578 ALC62_03578 ALC62_04124 ALC62_04124 ALC62_05816 ALC62_05816 ALC62_06316 ALC62_06316 ALC62_06668 ALC62_06668 ALC62_06667 ALC62_06667 ALC62_07488 ALC62_07488 ALC62_07509 ALC62_07509 ALC62_07782 ALC62_07782 ALC62_08062 ALC62_08062 ALC62_08957 ALC62_08957 ALC62_08950 ALC62_08950 ALC62_08704 ALC62_08704 ALC62_08948 ALC62_08948 ALC62_08981 ALC62_08981 ALC62_08974 ALC62_08974 ALC62_09220 ALC62_09220 ALC62_09244 ALC62_09244 ALC62_09245 ALC62_09245 ALC62_09943 ALC62_09943 ALC62_09933 ALC62_09933 ALC62_09937 ALC62_09937 ALC62_09936 ALC62_09936 ALC62_10043 ALC62_10043 ALC62_10044 ALC62_10044 ALC62_10041 ALC62_10041 ALC62_10271 ALC62_10271 ALC62_10422 ALC62_10422 ALC62_10475 ALC62_10475 ALC62_10957 ALC62_10957 ALC62_12726 ALC62_12726 ALC62_13124 ALC62_13124 ALC62_14230 ALC62_14230 ALC62_14325 ALC62_14325 ALC62_14623 ALC62_14623 ALC62_14993 ALC62_14993 ALC62_15375 ALC62_15375 ALC62_15454 ALC62_15454 ALC62_15494 ALC62_15494 ALC62_15711 ALC62_15711 ALC62_15643 ALC62_15643 ALC62_08857 ALC62_08857 ALC62_08729 ALC62_08729 ALC62_08759 ALC62_08759 ALC62_08159 ALC62_08159 ALC62_08038 ALC62_08038 ALC62_08148 ALC62_08148 ALC62_08031 ALC62_08031 ALC62_08029 ALC62_08029 ALC62_08035 ALC62_08035 ALC62_07720 ALC62_07720 ALC62_08160 ALC62_08160 ALC62_08006 ALC62_08006 ALC62_08037 ALC62_08037 ALC62_06750 ALC62_06750 ALC62_06079 ALC62_06079 ALC62_06171 ALC62_06171 ALC62_06170 ALC62_06170 ALC62_05905 ALC62_05905 ALC62_05494 ALC62_05494 ALC62_09818 ALC62_09818 ALC62_05771 ALC62_05771 ALC62_05661 ALC62_05661 ALC62_04880 ALC62_04880 ALC62_04823 ALC62_04823 ALC62_04686 ALC62_04686 ALC62_04350 ALC62_04350 ALC62_04398 ALC62_04398 ALC62_03941 ALC62_03941 ALC62_03428 ALC62_03428 ALC62_03446 ALC62_03446 ALC62_03342 ALC62_03342 ALC62_03639 ALC62_03639 ALC62_02907 ALC62_02907 ALC62_02494 ALC62_02494 ALC62_02537 ALC62_02537 ALC62_02436 ALC62_02436 ALC62_01694 ALC62_01694 ALC62_01446 ALC62_01446 ALC62_01324 ALC62_01324 ALC62_00510 ALC62_00510 ALC62_00192 ALC62_00192 ALC62_00234 ALC62_00234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC62_05761Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha. (1230 aa)
ALC62_09423RNA-binding motif protein, X-linked 2. (144 aa)
ALC62_09819Telomerase-binding protein EST1A. (83 aa)
ALC62_09821Telomerase-binding protein EST1A. (604 aa)
ALC62_11408Protein NEF1. (84 aa)
ALC62_11295Protein SMG5. (1026 aa)
ALC62_12231Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (611 aa)
ALC62_12675Uncharacterized protein. (3069 aa)
ALC62_12611Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family. (3467 aa)
ALC62_12968Cleavage stimulation factor subunit 1. (437 aa)
ALC62_12953Male-specific lethal 1 like protein. (785 aa)
ALC62_13904Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform. (150 aa)
ALC62_13898Cleavage and polyadenylation specificity factor subunit 4. (287 aa)
ALC62_13752Polymerase delta-interacting protein 3. (422 aa)
ALC62_14488TAR DNA-binding protein 43. (284 aa)
ALC62_13902Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (555 aa)
ALC62_14719DEAD-box helicase Dbp80. (481 aa)
ALC62_14185Eukaryotic translation initiation factor 2A. (533 aa)
ALC62_14535Nuclear RNA export factor 1. (529 aa)
ALC62_14390E3 ubiquitin-protein ligase RBBP6. (1935 aa)
ALC62_14489TAR DNA-binding protein 43. (489 aa)
ALC62_14683Pinin. (377 aa)
ALC62_15026Polyadenylate-binding protein 2. (355 aa)
ALC62_15881Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (478 aa)
ALC62_12654Cleavage stimulation factor subunit 2. (179 aa)
ALC62_00113Integrator complex subunit 9. (220 aa)
ALC62_00454Integrator complex subunit 11. (595 aa)
ALC62_00599Uncharacterized protein. (308 aa)
ALC62_00827Nucleoporin GLE1. (703 aa)
ALC62_01975Protein painting of fourth. (702 aa)
ALC62_02038Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (155 aa)
ALC62_03022Uncharacterized protein. (382 aa)
ALC62_03083Hsc70-interacting protein. (376 aa)
ALC62_03052Peptidylprolyl isomerase. (465 aa)
ALC62_03506Protein CLP1 like protein. (363 aa)
ALC62_03759Partner of Y14 and mago. (213 aa)
ALC62_03794RNA-binding protein Musashi like protein Rbp6. (416 aa)
ALC62_03578Serine/threonine-protein phosphatase. (309 aa)
ALC62_04124Uncharacterized protein CXorf41. (200 aa)
ALC62_05816Putative ATP-dependent RNA helicase YTHDC2. (1153 aa)
ALC62_06316RRM domain-containing protein. (1206 aa)
ALC62_06668Uncharacterized protein. (902 aa)
ALC62_06667U6 snRNA-specific terminal uridylyltransferase 1. (727 aa)
ALC62_07488Nuclear RNA export factor 1. (519 aa)
ALC62_07509Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma. (413 aa)
ALC62_07782Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (159 aa)
ALC62_08062Cleavage and polyadenylation specificity factor subunit 2. (737 aa)
ALC62_08957Twinfilin. (350 aa)
ALC62_08950WD repeat-containing protein 33. (1074 aa)
ALC62_08704Nuclear RNA export factor 1. (282 aa)
ALC62_08948RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (195 aa)
ALC62_08981Nuclear RNA export factor 1. (550 aa)
ALC62_08974WD repeat-containing protein 82. (315 aa)
ALC62_09220RNA-binding protein EWS. (419 aa)
ALC62_09244RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (157 aa)
ALC62_09245Protein CASC3. (791 aa)
ALC62_09943Regulator of nonsense transcripts 3A. (705 aa)
ALC62_09933Uncharacterized protein. (474 aa)
ALC62_09937Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
ALC62_09936Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
ALC62_10043Nuclear RNA export factor 1. (291 aa)
ALC62_10044Nuclear RNA export factor 1. (558 aa)
ALC62_10041Nuclear RNA export factor 1. (475 aa)
ALC62_10271YTH domain-containing protein 1. (515 aa)
ALC62_10422Heterogeneous nuclear ribonucleoprotein 27C. (400 aa)
ALC62_10475Nuclear cap-binding protein subunit 1. (804 aa)
ALC62_10957Cleavage and polyadenylation specificity factor subunit 3. (685 aa)
ALC62_12726Methylosome protein 50. (328 aa)
ALC62_13124Uncharacterized protein. (88 aa)
ALC62_14230Eukaryotic peptide chain release factor GTP-binding subunit ERF3A. (623 aa)
ALC62_14325Protein SERAC1. (680 aa)
ALC62_14623Protein painting of fourth. (616 aa)
ALC62_14993Uncharacterized protein. (161 aa)
ALC62_15375LisH domain-containing protein. (962 aa)
ALC62_15454COP9 signalosome complex subunit 5. (345 aa)
ALC62_15494Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (165 aa)
ALC62_15711Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (463 aa)
ALC62_15643Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (386 aa)
ALC62_08857Protein SMG7. (1163 aa)
ALC62_08729Pre-mRNA cleavage complex 2 protein Pcf11. (1860 aa)
ALC62_08759Putative E3 ubiquitin-protein ligase makorin-1. (432 aa)
ALC62_08159UPF0468 protein C16orf80 like protein. (505 aa)
ALC62_08038RNA-binding protein Musashi like protein Rbp6. (169 aa)
ALC62_08148Poly(A) RNA polymerase protein cid1. (1300 aa)
ALC62_08031RNA-binding protein Musashi like protein Rbp6. (139 aa)
ALC62_08029Uncharacterized protein. (80 aa)
ALC62_08035RNA-binding protein Musashi like protein Rbp6. (273 aa)
ALC62_07720Regulator of nonsense transcripts 1. (1120 aa)
ALC62_08160UPF0468 protein C16orf80 like protein. (193 aa)
ALC62_08006Apoptotic chromatin condensation inducer in the nucleus. (872 aa)
ALC62_08037RNA-binding protein Musashi like protein Rbp6. (221 aa)
ALC62_06750Formin-binding protein 4. (1033 aa)
ALC62_06079Cleavage and polyadenylation specificity factor subunit 1. (1563 aa)
ALC62_06171Putative ATP-dependent RNA helicase Dbp73D; Belongs to the DEAD box helicase family. (666 aa)
ALC62_06170Nonsense-mediated mRNA decay protein 2. (1110 aa)
ALC62_05905Transducin beta-like protein 2. (468 aa)
ALC62_05494Eukaryotic initiation factor 4A-III. (402 aa)
ALC62_09818Telomerase-binding protein EST1A. (1187 aa)
ALC62_05771Zinc finger CCCH domain-containing protein 6. (1178 aa)
ALC62_05661Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (317 aa)
ALC62_04880NTF2-related export protein. (136 aa)
ALC62_04823HBS1-like protein. (918 aa)
ALC62_04686ATP-dependent RNA helicase WM6. (438 aa)
ALC62_04350UPF0468 protein C16orf80 like protein. (178 aa)
ALC62_04398Integrator complex subunit 9. (638 aa)
ALC62_03941mRNA cap guanine-N7 methyltransferase. (455 aa)
ALC62_03428Serine/arginine repetitive matrix protein 1. (1404 aa)
ALC62_03446Pre-mRNA 3'-end-processing factor FIP1. (518 aa)
ALC62_03342Nuclear RNA export factor 2. (543 aa)
ALC62_03639Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (228 aa)
ALC62_02907Nuclear RNA export factor 1. (645 aa)
ALC62_02494RNA and export factor-binding protein 2. (250 aa)
ALC62_02537Leucine-rich repeat-containing protein 67. (359 aa)
ALC62_02436RNA-binding protein 8A. (169 aa)
ALC62_01694Protein mago nashi. (146 aa)
ALC62_01446RNA-binding protein with serine-rich domain 1. (326 aa)
ALC62_01324Protein suppressor of forked. (705 aa)
ALC62_00510Cleavage stimulation factor subunit 2. (491 aa)
ALC62_00192Serine/threonine-protein phosphatase 4 regulatory subunit 1. (1089 aa)
ALC62_00234Eukaryotic peptide chain release factor subunit 1. (745 aa)
Your Current Organism:
Cyphomyrmex costatus
NCBI taxonomy Id: 456900
Other names: C. costatus
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