(15 nodes) Mixed, incl. Spliceosomal conformational changes to generate catalytic conformation, and Helicase associated domain (HA2) Add an annotation network (Triticum urartu)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRIUR3_16851	Uncharacterized protein. (306 aa)
	TRIUR3_15857	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1264 aa)
	TRIUR3_01054	Pre-mRNA-splicing factor 18. (257 aa)
	TRIUR3_29038	COX assembly mitochondrial protein. (83 aa)
	TRIUR3_24536	Cir_N domain-containing protein. (825 aa)
	TRIUR3_34206	Putative ATP-dependent RNA helicase DHX35. (807 aa)
	TRIUR3_17924	Slu7 domain-containing protein. (535 aa)
	TRIUR3_01794	Pre-mRNA-splicing factor 18. (431 aa)
	TRIUR3_09943	Uncharacterized protein. (322 aa)
	TRIUR3_10370	Pre-mRNA-splicing factor cwc22. (555 aa)
	TRIUR3_00661	WD repeat-containing protein 25. (369 aa)
	TRIUR3_21866	Uncharacterized protein. (230 aa)
	T1LD24_TRIUA	Uncharacterized protein. (1629 aa)
	T1M6F1_TRIUA	Uncharacterized protein. (1267 aa)
	T1MK11_TRIUA	Uncharacterized protein. (1763 aa)

Your Current Organism:

Triticum urartu

NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1LD24_TRIUA	T1M6F1_TRIUA	T1LD24	T1M6F1	Uncharacterized protein.	Uncharacterized protein.	0.758
T1LD24_TRIUA	T1MK11_TRIUA	T1LD24	T1MK11	Uncharacterized protein.	Uncharacterized protein.	0.757
T1LD24_TRIUA	TRIUR3_00661	T1LD24	M8A2C0	Uncharacterized protein.	WD repeat-containing protein 25.	0.928
T1LD24_TRIUA	TRIUR3_01054	T1LD24	M7Z091	Uncharacterized protein.	Pre-mRNA-splicing factor 18.	0.921
T1LD24_TRIUA	TRIUR3_01794	T1LD24	M7ZKE8	Uncharacterized protein.	Pre-mRNA-splicing factor 18.	0.921
T1LD24_TRIUA	TRIUR3_09943	T1LD24	M7ZP64	Uncharacterized protein.	Uncharacterized protein.	0.922
T1LD24_TRIUA	TRIUR3_10370	T1LD24	M7ZZS0	Uncharacterized protein.	Pre-mRNA-splicing factor cwc22.	0.947
T1LD24_TRIUA	TRIUR3_15857	T1LD24	M7YZP9	Uncharacterized protein.	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	0.937
T1LD24_TRIUA	TRIUR3_16851	T1LD24	M7YL09	Uncharacterized protein.	Uncharacterized protein.	0.901
T1LD24_TRIUA	TRIUR3_17924	T1LD24	M7ZCD7	Uncharacterized protein.	Slu7 domain-containing protein.	0.948
T1LD24_TRIUA	TRIUR3_21866	T1LD24	M8ACD5	Uncharacterized protein.	Uncharacterized protein.	0.901
T1LD24_TRIUA	TRIUR3_24536	T1LD24	M7Z9Z1	Uncharacterized protein.	Cir_N domain-containing protein.	0.929
T1LD24_TRIUA	TRIUR3_29038	T1LD24	M7Z0Z9	Uncharacterized protein.	COX assembly mitochondrial protein.	0.907
T1LD24_TRIUA	TRIUR3_34206	T1LD24	M7ZAF6	Uncharacterized protein.	Putative ATP-dependent RNA helicase DHX35.	0.553
T1M6F1_TRIUA	T1LD24_TRIUA	T1M6F1	T1LD24	Uncharacterized protein.	Uncharacterized protein.	0.758
T1M6F1_TRIUA	T1MK11_TRIUA	T1M6F1	T1MK11	Uncharacterized protein.	Uncharacterized protein.	0.757
T1M6F1_TRIUA	TRIUR3_00661	T1M6F1	M8A2C0	Uncharacterized protein.	WD repeat-containing protein 25.	0.928
T1M6F1_TRIUA	TRIUR3_01054	T1M6F1	M7Z091	Uncharacterized protein.	Pre-mRNA-splicing factor 18.	0.921
T1M6F1_TRIUA	TRIUR3_01794	T1M6F1	M7ZKE8	Uncharacterized protein.	Pre-mRNA-splicing factor 18.	0.921
T1M6F1_TRIUA	TRIUR3_09943	T1M6F1	M7ZP64	Uncharacterized protein.	Uncharacterized protein.	0.922