(16 nodes) Oligonucleotide/oligosaccharide-binding (OB)-fold network (Triticum urartu)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRIUR3_05198	Putative ATP-dependent RNA helicase DHX36. (430 aa)
	TRIUR3_08326	ATP-dependent RNA helicase Dhx29. (989 aa)
	TRIUR3_13916	Putative ATP-dependent RNA helicase kurz. (1249 aa)
	TRIUR3_26651	Putative ATP-dependent RNA helicase kurz. (1146 aa)
	TRIUR3_23498	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4. (1113 aa)
	TRIUR3_20828	ATP-dependent RNA helicase DHX8. (696 aa)
	TRIUR3_15857	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1264 aa)
	TRIUR3_31620	Putative ATP-dependent RNA helicase DHX36. (1064 aa)
	TRIUR3_20747	Putative ATP-dependent RNA helicase YTHDC2. (1185 aa)
	TRIUR3_31571	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (954 aa)
	T1LD24_TRIUA	Uncharacterized protein. (1629 aa)
	T1M6F1_TRIUA	Uncharacterized protein. (1267 aa)
	T1N6F1_TRIUA	Uncharacterized protein. (512 aa)
	TRIUR3_15773	ATP-dependent RNA helicase dhx8. (686 aa)
	T1NPW6_TRIUA	Uncharacterized protein. (627 aa)
	TRIUR3_13212	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase. (643 aa)

Your Current Organism:

Triticum urartu

NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1LD24_TRIUA	T1M6F1_TRIUA	T1LD24	T1M6F1	Uncharacterized protein.	Uncharacterized protein.	0.758
T1LD24_TRIUA	T1NPW6_TRIUA	T1LD24	T1NPW6	Uncharacterized protein.	Uncharacterized protein.	0.922
T1LD24_TRIUA	TRIUR3_13212	T1LD24	M8A3B4	Uncharacterized protein.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase.	0.922
T1LD24_TRIUA	TRIUR3_13916	T1LD24	M7YHV8	Uncharacterized protein.	Putative ATP-dependent RNA helicase kurz.	0.950
T1LD24_TRIUA	TRIUR3_15773	T1LD24	M7ZL25	Uncharacterized protein.	ATP-dependent RNA helicase dhx8.	0.528
T1LD24_TRIUA	TRIUR3_15857	T1LD24	M7YZP9	Uncharacterized protein.	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	0.937
T1LD24_TRIUA	TRIUR3_20828	T1LD24	M7YZ92	Uncharacterized protein.	ATP-dependent RNA helicase DHX8.	0.507
T1LD24_TRIUA	TRIUR3_23498	T1LD24	M7YQ66	Uncharacterized protein.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4.	0.708
T1LD24_TRIUA	TRIUR3_26651	T1LD24	M8A6R1	Uncharacterized protein.	Putative ATP-dependent RNA helicase kurz.	0.950
T1LD24_TRIUA	TRIUR3_31571	T1LD24	M7ZC95	Uncharacterized protein.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.	0.704
T1M6F1_TRIUA	T1LD24_TRIUA	T1M6F1	T1LD24	Uncharacterized protein.	Uncharacterized protein.	0.758
T1M6F1_TRIUA	T1NPW6_TRIUA	T1M6F1	T1NPW6	Uncharacterized protein.	Uncharacterized protein.	0.923
T1M6F1_TRIUA	TRIUR3_13212	T1M6F1	M8A3B4	Uncharacterized protein.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase.	0.922
T1M6F1_TRIUA	TRIUR3_13916	T1M6F1	M7YHV8	Uncharacterized protein.	Putative ATP-dependent RNA helicase kurz.	0.951
T1M6F1_TRIUA	TRIUR3_15773	T1M6F1	M7ZL25	Uncharacterized protein.	ATP-dependent RNA helicase dhx8.	0.528
T1M6F1_TRIUA	TRIUR3_15857	T1M6F1	M7YZP9	Uncharacterized protein.	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	0.937
T1M6F1_TRIUA	TRIUR3_20828	T1M6F1	M7YZ92	Uncharacterized protein.	ATP-dependent RNA helicase DHX8.	0.509
T1M6F1_TRIUA	TRIUR3_23498	T1M6F1	M7YQ66	Uncharacterized protein.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4.	0.709
T1M6F1_TRIUA	TRIUR3_26651	T1M6F1	M8A6R1	Uncharacterized protein.	Putative ATP-dependent RNA helicase kurz.	0.950
T1M6F1_TRIUA	TRIUR3_31571	T1M6F1	M7ZC95	Uncharacterized protein.	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.	0.704