(22 nodes) Dormancy process network (Zea mays)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D6MJB0	Protein MARD1. (355 aa)
	K7TFB6_MAIZE	ABA-responsive protein. (272 aa)
	B8A0U2_MAIZE	Zinc ion binding. (351 aa)
	B6THZ2_MAIZE	Delay of germination 1. (297 aa)
	A0A1D6Q3S6	F-box protein GID2. (382 aa)
	A0A1D6P7I3	JmjN domain-containing protein. (147 aa)
	A0A1D6NW41	Protein DECREASED SIZE EXCLUSION LIMIT 1. (398 aa)
	A0A1D6N409	Lysine-specific demethylase REF6. (861 aa)
	A0A1D6MB23	JmjN domain-containing protein. (284 aa)
	A0A1D6LUJ1	G-protein coupled receptor 1. (349 aa)
	A0A1D6LNS1	E3 ubiquitin protein ligase. (871 aa)
	Pco068404	Seed maturation protein. (129 aa)
	Pco121831(436)	E3 ubiquitin protein ligase. (895 aa)
	A0A1D6J209	Chromatin complex subunit A. (1110 aa)
	A0A1D6IMX3	Uncharacterized protein. (114 aa)
	A0A1D6I9X6	Seipin-2. (462 aa)
	A0A1D6HTC2	Uncharacterized protein. (215 aa)
	A0A1D6HBI7	F-box protein GID2. (236 aa)
	A0A1D6GUS1	E3 ubiquitin protein ligase. (860 aa)
	A0A1D6GKR2	Protein MARD1. (322 aa)
	A0A1D6F0Y2	Putative ATP-dependent DNA helicase CHR12. (1116 aa)
	A0A1D6EAS7	Transcription factor bHLH95. (624 aa)

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6GUS1	A0A1D6LNS1	A0A1D6GUS1	A0A1D6LNS1	E3 ubiquitin protein ligase.	E3 ubiquitin protein ligase.	0.543
A0A1D6GUS1	B6THZ2_MAIZE	A0A1D6GUS1	B6THZ2	E3 ubiquitin protein ligase.	Delay of germination 1.	0.424
A0A1D6GUS1	Pco121831(436)	A0A1D6GUS1	A0A1D6K5I6	E3 ubiquitin protein ligase.	E3 ubiquitin protein ligase.	0.712
A0A1D6HBI7	A0A1D6Q3S6	A0A1D6HBI7	A0A1D6Q3S6	F-box protein GID2.	F-box protein GID2.	0.900
A0A1D6LNS1	A0A1D6GUS1	A0A1D6LNS1	A0A1D6GUS1	E3 ubiquitin protein ligase.	E3 ubiquitin protein ligase.	0.543
A0A1D6LNS1	B6THZ2_MAIZE	A0A1D6LNS1	B6THZ2	E3 ubiquitin protein ligase.	Delay of germination 1.	0.424
A0A1D6LNS1	Pco121831(436)	A0A1D6LNS1	A0A1D6K5I6	E3 ubiquitin protein ligase.	E3 ubiquitin protein ligase.	0.715
A0A1D6Q3S6	A0A1D6HBI7	A0A1D6Q3S6	A0A1D6HBI7	F-box protein GID2.	F-box protein GID2.	0.900
B6THZ2_MAIZE	A0A1D6GUS1	B6THZ2	A0A1D6GUS1	Delay of germination 1.	E3 ubiquitin protein ligase.	0.424
B6THZ2_MAIZE	A0A1D6LNS1	B6THZ2	A0A1D6LNS1	Delay of germination 1.	E3 ubiquitin protein ligase.	0.424
Pco121831(436)	A0A1D6GUS1	A0A1D6K5I6	A0A1D6GUS1	E3 ubiquitin protein ligase.	E3 ubiquitin protein ligase.	0.712
Pco121831(436)	A0A1D6LNS1	A0A1D6K5I6	A0A1D6LNS1	E3 ubiquitin protein ligase.	E3 ubiquitin protein ligase.	0.715