(61 nodes) 90S preribosome network (Zea mays)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1D6MAI6	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (560 aa)
	A0A1D6DUW8	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein. (55 aa)
	A0A1D6E1H8	Transducin family protein / WD-40 repeat family protein. (910 aa)
	A0A1D6EGE2	Nucleolar complex protein 2-like protein. (225 aa)
	A0A1D6EHD4	Uncharacterized protein. (142 aa)
	A0A1D6EIG7	Noc2p family. (760 aa)
	A0A1D6ETC9	Testis intracellular mediator protein. (303 aa)
	A0A1D6F523	CCAAT-binding factor. (213 aa)
	A0A1D6FA14	U3 small nucleolar RNA-associated protein 6. (681 aa)
	A0A1D6FCP6	Nucleolar complex protein 2-like protein. (229 aa)
	A0A1D6FQR0	Uncharacterized protein. (166 aa)
	Pco070730a	Nucleolar complex protein 2-like protein. (757 aa)
	A0A1D6GW55	KRR1 family protein. (638 aa)
	A0A1D6HQA1	Uncharacterized protein. (117 aa)
	A0A1D6HWX1	Ankyrin repeat family protein. (157 aa)
	A0A1D6I1X5	Testis intracellular mediator protein. (208 aa)
	A0A1D6I954	Testis intracellular mediator protein. (112 aa)
	A0A1D6I992	Nucleolar complex protein 2-like protein. (237 aa)
	A0A1D6IFQ7	Uncharacterized protein. (128 aa)
	A0A1D6IHA7	Uncharacterized protein. (110 aa)
	A0A1D6IHS5	Nucleolar complex protein 2-like protein. (157 aa)
	A0A1D6JBR0	Nucleolar complex protein 4. (649 aa)
	A0A1D6JDC4	Transducin family protein / WD-40 repeat family protein. (923 aa)
	A0A1D6JNW9	Transducin family protein / WD-40 repeat family protein. (959 aa)
	A0A1D6JPD0	Nucleolar complex protein 2-like protein. (218 aa)
	A0A1D6JSD2	Noc2p family. (363 aa)
	A0A1D6K1Z1	P-loop containing nucleoside triphosphate hydrolase superfamily protein. (1184 aa)
	A0A1D6K731	P-loop containing nucleoside triphosphate hydrolase superfamily protein. (238 aa)
	A0A1D6KCY5	Pumilio homolog 23. (841 aa)
	A0A1D6KDA6	CCAAT-binding factor. (230 aa)
	A0A1D6KNK9	WD_REPEATS_REGION domain-containing protein. (422 aa)
	A0A1D6KWQ3	Uncharacterized protein. (922 aa)
	A0A1D6L1V4	Nucleolar complex protein 2-like protein. (111 aa)
	A0A1D6LW26	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein. (198 aa)
	A0A1D6LYK9	Putative AP2/EREBP transcription factor superfamily protein. (392 aa)
	A0A1D6MAS1	Periodic tryptophan protein 2. (885 aa)
	A0A1D6MEG3	Putative DUF947 domain containing family protein. (167 aa)
	A0A1D6MIF0	ARM repeat superfamily protein. (2549 aa)
	A0A1D6MIM0	ARM repeat superfamily protein. (1131 aa)
	Gpm697	ARM repeat superfamily protein. (1733 aa)
	A0A1D6ML08	ARM repeat superfamily protein. (210 aa)
	A0A1D6MRB0	Uncharacterized protein. (358 aa)
	A0A1D6MSU7	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (737 aa)
	A0A1D6MUH7	Uncharacterized protein. (140 aa)
	A0A1D6MZH7	Uncharacterized protein. (1052 aa)
	A0A1D6MZT3	ARM repeat superfamily protein. (1207 aa)
	A0A1D6N841	P-loop containing nucleoside triphosphate hydrolase superfamily protein. (161 aa)
	A0A1D6NCD9	Transducin family protein / WD-40 repeat family protein. (382 aa)
	A0A1D6NDR6	Testis intracellular mediator protein. (230 aa)
	A0A1D6P3S7	Transducin family protein / WD-40 repeat family protein. (914 aa)
	A0A1D6Q027	Putative AP2/EREBP transcription factor superfamily protein. (205 aa)
	A0A1D6Q599	Putative AP2/EREBP transcription factor superfamily protein. (149 aa)
	A0A1D6Q6E5	Ankyrin repeat family protein. (306 aa)
	A0A1D6QKK7	Testis intracellular mediator protein. (275 aa)
	A0A1D6QNU5	Nucleolar complex protein 2-like protein. (243 aa)
	A0A1D6QSP0	Uncharacterized protein. (135 aa)
	A0A1R3QFZ8	Testis intracellular mediator protein. (188 aa)
	Si946009b02	Ribosomal RNA-processing protein. (372 aa)
	B4FFH2_MAIZE	U3 small nucleolar RNA-associated protein 18-like protein. (556 aa)
	Pco083390	Ribosomal RNA processing Brix domain protein. (293 aa)
	Pco136431	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (619 aa)

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6DUW8	A0A1D6E1H8	A0A1D6DUW8	A0A1D6E1H8	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Transducin family protein / WD-40 repeat family protein.	0.978
A0A1D6DUW8	A0A1D6EGE2	A0A1D6DUW8	A0A1D6EGE2	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Nucleolar complex protein 2-like protein.	0.758
A0A1D6DUW8	A0A1D6EIG7	A0A1D6DUW8	A0A1D6EIG7	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Noc2p family.	0.758
A0A1D6DUW8	A0A1D6ETC9	A0A1D6DUW8	A0A1D6ETC9	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Testis intracellular mediator protein.	0.858
A0A1D6DUW8	A0A1D6F523	A0A1D6DUW8	A0A1D6F523	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	CCAAT-binding factor.	0.959
A0A1D6DUW8	A0A1D6FA14	A0A1D6DUW8	A0A1D6FA14	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	U3 small nucleolar RNA-associated protein 6.	0.980
A0A1D6DUW8	A0A1D6FCP6	A0A1D6DUW8	A0A1D6FCP6	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Nucleolar complex protein 2-like protein.	0.758
A0A1D6DUW8	A0A1D6GW55	A0A1D6DUW8	A0A1D6GW55	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	KRR1 family protein.	0.764
A0A1D6DUW8	A0A1D6HWX1	A0A1D6DUW8	A0A1D6HWX1	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Ankyrin repeat family protein.	0.858
A0A1D6DUW8	A0A1D6I1X5	A0A1D6DUW8	A0A1D6I1X5	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Testis intracellular mediator protein.	0.858
A0A1D6DUW8	A0A1D6I954	A0A1D6DUW8	A0A1D6I954	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Testis intracellular mediator protein.	0.704
A0A1D6DUW8	A0A1D6I992	A0A1D6DUW8	A0A1D6I992	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Nucleolar complex protein 2-like protein.	0.758
A0A1D6DUW8	A0A1D6IHS5	A0A1D6DUW8	A0A1D6IHS5	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Nucleolar complex protein 2-like protein.	0.758
A0A1D6DUW8	A0A1D6JBR0	A0A1D6DUW8	A0A1D6JBR0	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Nucleolar complex protein 4.	0.959
A0A1D6DUW8	A0A1D6JDC4	A0A1D6DUW8	A0A1D6JDC4	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Transducin family protein / WD-40 repeat family protein.	0.978
A0A1D6DUW8	A0A1D6JNW9	A0A1D6DUW8	A0A1D6JNW9	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Transducin family protein / WD-40 repeat family protein.	0.987
A0A1D6DUW8	A0A1D6JPD0	A0A1D6DUW8	A0A1D6JPD0	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Nucleolar complex protein 2-like protein.	0.758
A0A1D6DUW8	A0A1D6JSD2	A0A1D6DUW8	A0A1D6JSD2	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	Noc2p family.	0.758
A0A1D6DUW8	A0A1D6K1Z1	A0A1D6DUW8	A0A1D6K1Z1	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	P-loop containing nucleoside triphosphate hydrolase superfamily protein.	0.967
A0A1D6DUW8	A0A1D6K731	A0A1D6DUW8	A0A1D6K731	Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.	P-loop containing nucleoside triphosphate hydrolase superfamily protein.	0.967