STRINGSTRING
B4FD21_MAIZE B4FD21_MAIZE Umc2567 Umc2567 B4FAF4_MAIZE B4FAF4_MAIZE B4FRC1_MAIZE B4FRC1_MAIZE Pco074093 Pco074093 A0A1D6PJM8 A0A1D6PJM8 A0A1D6MXH1 A0A1D6MXH1 A0A1D6L3U5 A0A1D6L3U5 A0A1D6KQR1 A0A1D6KQR1 Pco156628 Pco156628 Rgh3 Rgh3 A0A1D6F7Q3 A0A1D6F7Q3 A0A1D6F7N0 A0A1D6F7N0 B6TRJ7_MAIZE B6TRJ7_MAIZE K7V1E2_MAIZE K7V1E2_MAIZE C0P5Z8_MAIZE C0P5Z8_MAIZE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B4FD21_MAIZEU2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (539 aa)
Umc2567Splicing factor U2af small subunit A. (287 aa)
B4FAF4_MAIZESplicing factor U2af small subunit A. (307 aa)
B4FRC1_MAIZECarbohydrate-binding X8 domain superfamily protein. (491 aa)
Pco074093Splicing factor U2af large subunit A. (598 aa)
A0A1D6PJM8RNA-binding (RRM/RBD/RNP motifs) family protein. (976 aa)
A0A1D6MXH1Splicing factor U2af small subunit A. (172 aa)
A0A1D6L3U5Aluminum induced protein with YGL and LRDR motifs. (374 aa)
A0A1D6KQR1Uncharacterized protein. (67 aa)
Pco156628Stem-specific protein TSJT1. (265 aa)
Rgh3Rough endosperm3. (759 aa)
A0A1D6F7Q3Splicing factor U2af large subunit B. (704 aa)
A0A1D6F7N0Splicing factor U2af large subunit A. (629 aa)
B6TRJ7_MAIZESplicing factor U2af small subunit A. (299 aa)
K7V1E2_MAIZESplicing factor U2af subunit isoform 1. (304 aa)
C0P5Z8_MAIZECarbohydrate-binding X8 domain superfamily protein. (613 aa)
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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