(11 nodes) ATPase, alpha/beta subunit, nucleotide-binding domain, active site network (Zea mays)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VATA_MAIZE	V-type proton ATPase catalytic subunit A; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (561 aa)
	atpA	ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (507 aa)
	atpB	ATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (498 aa)
	Vpp3	Vacuolar proton pump3. (621 aa)
	B6T9C0_MAIZE	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (487 aa)
	A0A1D6P248	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (498 aa)
	A0A1D6NFC0	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (569 aa)
	A0A1D6H1R5	V-type proton ATPase catalytic subunit A. (503 aa)
	A0A1D6FJP5	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (553 aa)
	atp1-a2	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (508 aa)
	ATPB	ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...] (553 aa)

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6FJP5	A0A1D6H1R5	A0A1D6FJP5	A0A1D6H1R5	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	V-type proton ATPase catalytic subunit A.	0.656
A0A1D6FJP5	A0A1D6NFC0	A0A1D6FJP5	A0A1D6NFC0	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.900
A0A1D6FJP5	A0A1D6P248	A0A1D6FJP5	A0A1D6P248	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.965
A0A1D6FJP5	ATPB	A0A1D6FJP5	P19023	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...]	0.901
A0A1D6FJP5	B6T9C0_MAIZE	A0A1D6FJP5	B6T9C0	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.965
A0A1D6FJP5	VATA_MAIZE	A0A1D6FJP5	P49087	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	V-type proton ATPase catalytic subunit A; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.640
A0A1D6FJP5	Vpp3	A0A1D6FJP5	C0PHC0	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Vacuolar proton pump3.	0.651
A0A1D6FJP5	atp1-a2	A0A1D6FJP5	Q6R987	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.978
A0A1D6FJP5	atpA	A0A1D6FJP5	P05022	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	0.970
A0A1D6FJP5	atpB	A0A1D6FJP5	P00827	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.	0.552
A0A1D6H1R5	A0A1D6FJP5	A0A1D6H1R5	A0A1D6FJP5	V-type proton ATPase catalytic subunit A.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.656
A0A1D6H1R5	A0A1D6NFC0	A0A1D6H1R5	A0A1D6NFC0	V-type proton ATPase catalytic subunit A.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.660
A0A1D6H1R5	A0A1D6P248	A0A1D6H1R5	A0A1D6P248	V-type proton ATPase catalytic subunit A.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.804
A0A1D6H1R5	ATPB	A0A1D6H1R5	P19023	V-type proton ATPase catalytic subunit A.	ATP synthase subunit beta, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the c [...]	0.683
A0A1D6H1R5	B6T9C0_MAIZE	A0A1D6H1R5	B6T9C0	V-type proton ATPase catalytic subunit A.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.804
A0A1D6H1R5	atp1-a2	A0A1D6H1R5	Q6R987	V-type proton ATPase catalytic subunit A.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.790
A0A1D6H1R5	atpA	A0A1D6H1R5	P05022	V-type proton ATPase catalytic subunit A.	ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.	0.759
A0A1D6H1R5	atpB	A0A1D6H1R5	P00827	V-type proton ATPase catalytic subunit A.	ATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.	0.623
A0A1D6NFC0	A0A1D6FJP5	A0A1D6NFC0	A0A1D6FJP5	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.900
A0A1D6NFC0	A0A1D6H1R5	A0A1D6NFC0	A0A1D6H1R5	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	V-type proton ATPase catalytic subunit A.	0.660