8 items (Zea mays) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cl4501_1	Protein-lysine N-methyltransferase ZEAMMB73_Zm00001d043827; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. (361 aa)
	K7UY48_MAIZE	Protein-lysine N-methyltransferase ZEAMMB73_Zm00001d008502; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family. (332 aa)
	MMT1	Methionine S-methyltransferase; Catalyzes the S-methylmethionine (SMM) biosynthesis from adenosyl-L-homocysteine (AdoMet) and methionine. SMM biosynthesis (by MMT1) and degradation (by HMT-1, HMT-2 and HMT-3) constitute the SMM cycle in plants, which is probably required to achieve short term control of AdoMet level. Also able to catalyze the selenium- methylmethionine (SeMM) from AdoMet and selenium-methionine (SeMet). May play a role in phoem sulfur transport; such function is however not essential; Belongs to the class I-like SAM-binding methyltransferase superfamily. (1091 aa)
	K7UD54_MAIZE	S-adenosylmethionine-dependent methyltransferase/ catalytic. (252 aa)
	A0A1D6FWJ2	Methionine S-methyltransferase. (1124 aa)
	A0A1D6EFY7	Zinc finger CCCH domain-containing protein 24; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (843 aa)
	A0A1D6MWB7	S-adenosyl-L-methionine-dependent methyltransferase superfamily protein. (551 aa)
	A0A1D6J2R7	Zinc finger CCCH domain-containing protein 24; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (875 aa)

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6MWB7	Cl4501_1	A0A1D6MWB7	A0A1D6NFB1	S-adenosyl-L-methionine-dependent methyltransferase superfamily protein.	Protein-lysine N-methyltransferase ZEAMMB73_Zm00001d043827; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.481
A0A1D6MWB7	K7UY48_MAIZE	A0A1D6MWB7	K7UY48	S-adenosyl-L-methionine-dependent methyltransferase superfamily protein.	Protein-lysine N-methyltransferase ZEAMMB73_Zm00001d008502; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.481
Cl4501_1	A0A1D6MWB7	A0A1D6NFB1	A0A1D6MWB7	Protein-lysine N-methyltransferase ZEAMMB73_Zm00001d043827; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	S-adenosyl-L-methionine-dependent methyltransferase superfamily protein.	0.481
K7UY48_MAIZE	A0A1D6MWB7	K7UY48	A0A1D6MWB7	Protein-lysine N-methyltransferase ZEAMMB73_Zm00001d008502; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	S-adenosyl-L-methionine-dependent methyltransferase superfamily protein.	0.481